PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV47639.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bZIP
Protein Properties Length: 260aa    MW: 28363.7 Da    PI: 10.098
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV47639.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.63.7e-15193253161
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                 +ke kr +r+ +NR++A+  R+RKka++  Le +vkeLe++N +L ++l++l++e + l++
  KZV47639.1 193 DKENKRLKRLLRNRVSAQQARERKKAYLIDLEGRVKELETKNAELEERLSTLQNENQMLRQ 253
                 5899****************************************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF156972.2E-121103IPR031421Protein of unknown function DUF4666
SMARTSM003387.8E-16193257IPR004827Basic-leucine zipper domain
PfamPF001707.5E-14194253IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.312195258IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-13197254No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-16197254No hitNo description
CDDcd147042.02E-19198249No hitNo description
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0010099Biological Processregulation of photomorphogenesis
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0010224Biological Processresponse to UV-B
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MAGLKRSARS FRRQGSSGLV WDDDELAAGF YQFVQTEGKL GELRHCHSLG GDSCGATPAD  60
QGSLKAAPHV YSRSVSAPIT NPRLPKFVRK VLFAGFFGKP PKSGEHANEG REMQEQATSS  120
IAANSLPSSS ERSSSSALNV EVKEGMESDD EIRRVPEMGG EAAGLMASGG GSVGGPVQQS  180
TSGSRRRGRS PADKENKRLK RLLRNRVSAQ QARERKKAYL IDLEGRVKEL ETKNAELEER  240
LSTLQNENQM LRQVNFDLVF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00117ampDAPTransfer from AT5G11260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV47639.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081579.19e-72transcription factor HY5 isoform X1
SwissprotQ9SM509e-64HY5_SOLLC; Transcription factor HY5
TrEMBLA0A2Z7CSC30.0A0A2Z7CSC3_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000535765e-65(Solanum tuberosum)
STRINGMigut.A00054.1.p4e-65(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80372430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.15e-26bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]