PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV46392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | Trihelix | ||||||||
Protein Properties | Length: 346aa MW: 39005.1 Da PI: 10.3382 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 44.1 | 5.2e-14 | 53 | 143 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ ++L+ea ++ l+rg+l++++W+ev++++ + +++r+ +qCk++++ ++k+yk +k + + + sst+p+fd+l+ KZV46392.1 53 CWSEDASRTLVEAWGSRYLVLNRGNLRQKHWQEVADAVnsvhgDSFKLRRTDVQCKNRIDTIKKKYKIEKSKVVQSNGRYSSTWPHFDSLD 143 7*************************************999999999***********************9999999999*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 9.1E-24 | 51 | 145 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence Send to blast |
MSPSRTPSPA LSSAASPISG DDKNVHSSPS SPAKPEPPHP ATRTSVFPTR EDCWSEDASR 60 TLVEAWGSRY LVLNRGNLRQ KHWQEVADAV NSVHGDSFKL RRTDVQCKNR IDTIKKKYKI 120 EKSKVVQSNG RYSSTWPHFD SLDSLIGDTF VKTNNSNSNG HRRNLRRRVS QSPEASPSPP 180 RLPGTLTLYR NISPDRIPHI VKDPEPGQLL RGPWSVPVGP RTKRSGPPSL TERNFSVMAA 240 AAAAMKAKEE EEEDDEDSDD WGVRPPAVGI KRKGVTAVEG CLKLAEAIGR LGSIYERVEE 300 AKQRQMLELE KQRMQFAKDL EIQRMKLFMV QLEKFKRVKS EQRFTW |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV46392.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022872518.1 | 1e-117 | trihelix transcription factor ASIL2-like | ||||
TrEMBL | A0A2Z7CH73 | 0.0 | A0A2Z7CH73_9LAMI; Uncharacterized protein | ||||
STRING | Migut.M00262.1.p | 1e-107 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1318 | 23 | 70 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 3e-34 | sequence-specific DNA binding transcription factors |