PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV44796.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 391aa    MW: 43989.1 Da    PI: 6.1922
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV44796.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.9e-30214268155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 k+r+rWt++LH+rFve v++LGG+ekAtPk+il lm+  gLt+ hvkSHLQkYR 
  KZV44796.1 214 KTRIRWTQDLHDRFVESVNRLGGHEKATPKAILTLMDTVGLTIFHVKSHLQKYRN 268
                 68****************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.073211271IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.1E-27212269IPR009057Homeodomain-like
SuperFamilySSF466893.76E-15212268IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-23214269IPR006447Myb domain, plants
PfamPF002493.0E-7218267IPR001005SANT/Myb domain
PfamPF143799.5E-18298345IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MKGISRFDGF SSDFTAESPD YFPQVYGIQY QSASNGLQNQ LAGTQQHIVW PHDSSNTMIS  60
RIGPQAPALY ENEIYMGLSQ IGSQEKSSTC CSQQFKNSYT KIPVYQESRD GFMGCAPARN  120
EPDFRPSNSL PIRREGLYND PFGNFSVGEQ IRCLEKKLLG DLDDSDRRSP SVPFDANQDL  180
GVTQNLYASH SALARHLRSN NSTSLSPGAV STSKTRIRWT QDLHDRFVES VNRLGGHEKA  240
TPKAILTLMD TVGLTIFHVK SHLQKYRNAK YVPESVEDKS EKKSSTNNAA HIDVKTGMQL  300
KEALQLQLDV QKRLHEQLES QRVLQMRIEE QAKQLKMMLD QQQRTTPSSV ELRDPNDESP  360
GFNISATMLE DPEVFDLDGC DDDKIFPSKI S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-21214271158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-21214271158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-21214271158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-21214271158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-21214271259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV44796.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075159.11e-150myb family transcription factor PHL5 isoform X1
TrEMBLA0A2Z7CJ490.0A0A2Z7CJ49_9LAMI; Uncharacterized protein
STRINGMigut.J01825.1.p1e-107(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.18e-59G2-like family protein