PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV44417.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB_related
Protein Properties Length: 788aa    MW: 86841.1 Da    PI: 9.9649
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV44417.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.25.8e-11105149347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + + lG+g+W+ Iar     Rt+ q+ s+ qky
       KZV44417.1 105 PWTEEEHRMFLLGLQNLGKGDWRGIARNYVISRTPTQVASHAQKY 149
                      7*****************************89************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.94498154IPR017930Myb domain
SuperFamilySSF466895.23E-16100155IPR009057Homeodomain-like
TIGRFAMsTIGR015573.7E-18101153IPR006447Myb domain, plants
SMARTSM007171.0E-8102152IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.7E-10103148IPR009057Homeodomain-like
PfamPF002492.8E-9105149IPR001005SANT/Myb domain
CDDcd001671.28E-7105150No hitNo description
PfamPF041951.5E-7334437IPR007321Transposase (putative), gypsy type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    Send to blast
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGSIRKSAS MGNLTHYMGG GGGSGSGTPP  60
NGVFADSPAD TPDHPSAASA AADGYGSEDF VAGSSSSRER KKGIPWTEEE HRMFLLGLQN  120
LGKGDWRGIA RNYVISRTPT QVASHAQKYF IRQSNMSRRK RRSSLFDIVA DEILTVRPVD  180
EAPGSRSEGI GVAIGDEVVA GGTCRCWRPW LKAGDLGKFF VVGGRGRSRG GVYTCEGNCA  240
GRISRGKDLS LLMADRDSGR TSLEDSGDKG GSEIRLSDPN SLDPSTTHIH HERLELENAH  300
EVLRRLGLCV KSDIIIPKKG DMCHEPPSGY FTAYLEHFSN GFSLPPNALL VEIVRSLGVS  360
FSQLTPNAIV AFACFHRRMS EIRIPVTLDL FHALFSARCT GPGSYIYFQP RLDCKFLSRI  420
RSPRGSWKSN FLYVRDRGWG VPTTWSSGLS KIKIGGTHHA LQLECGSLGL FDETIDPRLL  480
LPPGKKIDPS EVRALQNGAG RRPVKAPWVR PPRRRVGPNS RDAPRRMGSP RSTVRRSSPQ  540
SRQRPVADGK STSDRRKELG PKSGDVPRQS GEAGAQKNLK RSREVENGAS HNASGGGHLF  600
VEGVNRRDRA GSFWDMSDPD LGWSMGETLV GDHDVLHLLP QPTESLTHAL AWNACQVLSL  660
ASTFQLREER SRNSESKLHE EIAMLREELL KKQKESDEKS KSCETLRVEL EEKSKSYDAL  720
RPESLAILLR QGWPGLLHSG CLSRLLGSLT LNMESFRSDL LQSRWLFCSD RAGQASYIRV  780
AFRDCLGR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV44417.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7CEX20.0A0A2Z7CEX2_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-77MYB_related family protein