PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV44072.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 307aa    MW: 33959.1 Da    PI: 5.5148
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV44072.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.93.4e-103584141
    trihelix  1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrer 41
                rWt+qe+l+Li+++r  e+r++rg+         + +p+W++v++++++r
  KZV44072.1 35 RWTRQEILVLIQGKRVAENRVKRGRvsgfglgsgQVEPKWASVASYCKRR 84
                8**********************97778888888*************665 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050777Biological Processnegative regulation of immune response
GO:0071219Biological Processcellular response to molecule of bacterial origin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MKLEQLSLAP GPVDGTADGR HPSGDDGVKI PRLPRWTRQE ILVLIQGKRV AENRVKRGRV  60
SGFGLGSGQV EPKWASVASY CKRRSRLFWL MRNDLRRERK LPGFFDKEVY DILDGGGGVG  120
VGGEDEEEVA GELSLALAPA ATLGEATEGG DEAEALFDSG RSAVADEGLF SDFEQSAREE  180
EQARNPDHKT IDIYAIPIHK LFSAQKFDQF SWGITNEKQP VSDAEVRSTQ EGHKRKRIAS  240
DGDREATSIE LQLIEALEKN GKLLGLQLET HNSHLQLERE QRKEHMNGLI TVLNKLADAL  300
GRIADKL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00288DAPTransfer from AT2G33550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV44072.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022887682.11e-108trihelix transcription factor ASR3
SwissprotQ8VZ201e-74ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLA0A2Z7CAP60.0A0A2Z7CAP6_9LAMI; Uncharacterized protein
STRINGMigut.K01061.1.p1e-105(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.13e-71Trihelix family protein
Publications ? help Back to Top
  1. Vidal EA, et al.
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
    BMC Genomics, 2013. 14: p. 701
    [PMID:24119003]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]