PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41646.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 428aa    MW: 49139.5 Da    PI: 5.6309
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41646.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-05152175123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 y C+ Cg+ + ++++Lk+H r  H
  KZV41646.1 152 YICSVCGRKCATNMDLKKHFRQlH 175
                 89*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.10104.6E-7100142IPR029060PIN domain-like
PROSITE profilePS5015711.448152180IPR007087Zinc finger, C2H2
SMARTSM003550.0061152175IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280154175IPR007087Zinc finger, C2H2
CDDcd061673.39E-12164304No hitNo description
Gene3DG3DSA:3.40.50.10104.6E-7237291IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MAIGISIKPI ILNPRFPFFT LESNSLKTLS NPNPQVVLLS SKPPRQWGPI KSCMADREID  60
MVKTKEGVYA ANDKKVVVLW DLDNKPPRGP PFEAAMALKG VAQKFGDVVD ISAYANRHAF  120
IHLPQWVVEE RRERRLMDVM ERKGMYTPSE TYICSVCGRK CATNMDLKKH FRQLHERERQ  180
KKLTRMRSLK GKKRQRYKER FIDGNEKYNA AARSLLTPKV GYGLAQELKR AGVFVKTVED  240
KPQAADWALK RQMLHSMSRG VDWIVLVSDD SDFSEMLRKA KEANLGTVVV GDRDRALGVY  300
ADVWVPWSRV ENREIQESDL QLKSRGWRDL DERSESFSFS QIDGGAHIDE RSLDERVQRM  360
DFDGFTISAF SEGEEDYELE EDWAEKRLYR VDNAVDQLTV GSSSPGDEDD EGDYLLDSED  420
EFGDDAYF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41646.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011069738.10.0uncharacterized protein LOC105155542
TrEMBLA0A2Z7C4190.0A0A2Z7C419_9LAMI; Uncharacterized protein
STRINGMigut.C00545.1.p1e-180(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122681518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-157C2H2-like zinc finger protein