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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KZV41309.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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| Family |
M-type_MADS |
| Protein Properties |
Length: 190aa MW: 21577 Da PI: 9.3493 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KZV41309.1 | genome | CNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 68.1 | 8.2e-22 | 20 | 67 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
i ++ r vtfskRrng++KKA ELS+LC+a++a+iifs+ ++ y +
KZV41309.1 20 LIADENARVVTFSKRRNGLFKKATELSTLCAAKIAIIIFSPCNRAYSF 67
5889999**********************************9999987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MAPPDGRRKS MGRRKIDMKL IADENARVVT FSKRRNGLFK KATELSTLCA AKIAIIIFSP 60
CNRAYSFGNP NVDYVIDQFR NHFPVADPVA FVRGTNMQQL KDRCDEINEE LEMKKRKGKE 120
MEERLSGCRA LLEDLDLATL KEMKEKLERL REQLAGLRPK SGPGECSNVA RFSCLEEGNA 180
SPIPSDWLKL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1tqe_P | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 1tqe_Q | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 1tqe_R | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 1tqe_S | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 5f28_C | 9e-15 | 11 | 82 | 1 | 72 | MEF2C |
| 5f28_D | 9e-15 | 11 | 82 | 1 | 72 | MEF2C |
| 6byy_A | 7e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6byy_B | 7e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6byy_C | 7e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6byy_D | 7e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6bz1_A | 8e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6bz1_B | 8e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6bz1_C | 8e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6bz1_D | 8e-15 | 11 | 82 | 1 | 72 | MEF2 CHIMERA |
| 6c9l_A | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 6c9l_B | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 6c9l_C | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 6c9l_D | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 6c9l_E | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
| 6c9l_F | 7e-15 | 11 | 82 | 1 | 72 | Myocyte-specific enhancer factor 2B |
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