PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41150.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 393aa    MW: 44147.9 Da    PI: 8.6965
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41150.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.64.3e-31261316156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W+peLH+rF++a+++LGG++ AtPk+i+elm v+gL++++vkSHLQkYRl+
  KZV41150.1 261 KQRRCWSPELHRRFIDALQKLGGAQAATPKQIRELMRVDGLSNDEVKSHLQKYRLH 316
                 79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.813258318IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.3E-27259319IPR009057Homeodomain-like
SuperFamilySSF466897.17E-17259319IPR009057Homeodomain-like
TIGRFAMsTIGR015576.6E-26261316IPR006447Myb domain, plants
PfamPF002491.5E-7263314IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010092Biological Processspecification of organ identity
GO:0010629Biological Processnegative regulation of gene expression
GO:0048449Biological Processfloral organ formation
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MGSLIASGLS LDRRVLSAPS IGEFLSQVSR IHDQSERVAK LDDYVYGLES EIKKIEVFKR  60
ELPICMRIVN EVMVIMKEEL AEYKKSKTMP VLKEFIPLKG TNEEKDEKNK ISREHGVNSS  120
DKMNWMSSVQ LCNSVNQNHH PNSGSGNNNE TLKLNKIKGV EEEMNPPMMN GILRGGISMA  180
IGTAFAPFGR NNLHMMMVSK EDGDELNGPT PRDIRIKNPG EEIDYGGFSS KSCCSRSGSS  240
SAIDDQTNLR ARQKSQQMAR KQRRCWSPEL HRRFIDALQK LGGAQAATPK QIRELMRVDG  300
LSNDEVKSHL QKYRLHARRV STMNSSTDPV VLGRSWMSKE QYSESSKLGN SPSGSPQGHI  360
QVNGGHSMDD EDDEKPESLS WRDHMQLSRR DGN
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00475DAPTransfer from AT4G37180Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41150.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088301.11e-123myb family transcription factor EFM isoform X1
TrEMBLA0A2Z7C8Z70.0A0A2Z7C8Z7_9LAMI; Uncharacterized protein
STRINGVIT_03s0063g01060.t011e-93(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43612443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.11e-45G2-like family protein