PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV40881.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 670aa    MW: 74045.8 Da    PI: 5.7929
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV40881.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.4e-12173218655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P      +k  + a++Le+Av Y+k Lq
  KZV40881.1 173 SIAERMRRTRISDRIRKLQELVPDM----DKQTNTADMLEEAVAYVKFLQ 218
                 689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.227167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-14170226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.97E-11171222No hitNo description
Gene3DG3DSA:4.10.280.101.2E-14172226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.8E-13173223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-9173218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    Send to blast
MQSESGGESG ELSRGGGLAR FRSAPATWLE ALLESDEEPS DVFMELPKPP SDAATDLELL  60
ESTGSGGLSN FLRQNSSPAE LLSLLNNSDG YFSSLGIPAS YDYPSSTSAK RARHGDALDK  120
LPPKLSSSSL MPVEEKGGQE SIMSLDAEMD NLFEDSVMCR VRAKRGCATH PRSIAERMRR  180
TRISDRIRKL QELVPDMDKQ TNTADMLEEA VAYVKFLQKQ IQTQKYMADI DRKVEKWEAS  240
SLPESKEIIS NDTVGAGASD NPEKSDESGN KSQDLFISSY RISDKNAFES VSSVSKHGSN  300
IIFQCKARLC ETETSMTRLS KDGVDKLNSV AAVFDLNEDI SEDGKDGFIQ PDVEAVSTCS  360
VIKVVAKAGI PRGLPTVPLK FEGGQNWIGS TEMSAFRSVA LSNMFLSEPC SKKRRRPRGF  420
TGIDLNVAAV EEHCSTLQEH FCSEVGSKRA KNLSNDLNFL RGDANCSNLN AYRCKEVASN  480
NFHRPGQDHE PLGNKTSDHS TNPGNREIDF INHASLTDSS TMRQEQDTNH KQYLVAANNV  540
LQPLPWQPKF PYLSCTLQPQ NIFSEVPFSQ NHVPYTYHPQ EHGNLVQIIN GPNMRNRAIS  600
MRTIDAKAMR SMPTSGTRIG EGAPLILLTG NPRDEHIKSL VNQETWFAML TKGQEPGGMN  660
YHQLGYRQDI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV40881.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7C4P70.0A0A2Z7C4P7_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117871923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.13e-41bHLH family protein