PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV37408.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 358aa    MW: 38713.7 Da    PI: 5.2224
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV37408.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.3e-30183241259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YY+C+++ gC+++k+ver+++dp ++++tY+ eHnh+
  KZV37408.1 183 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCMARKQVERNRSDPGMFIVTYTAEHNHP 241
                 79************************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.6E-31175243IPR003657WRKY domain
PROSITE profilePS5081134.934177243IPR003657WRKY domain
SuperFamilySSF1182902.22E-26179243IPR003657WRKY domain
SMARTSM007742.3E-36182242IPR003657WRKY domain
PfamPF031069.0E-26184241IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MEDDWDLQAV VRGCGSTSSA TATATATSSS TSITTATIPT PPNDLSTASF LQNYNSTSAA  60
YNCQDLFQPR RESFVEDLHD LYKPFFPGSQ QLAPQIRSVT TPKSLPISPL SVLGAFQGGL  120
SSSEQQQQQL LQQTQITQKQ LPISVANASK ATSVSQNPTS RSTKRRKNNL KRVCHVPAES  180
LSSDMWSWRK YGQKPIKGSP YPRGYYKCST SKGCMARKQV ERNRSDPGMF IVTYTAEHNH  240
PIPTHRNSLA GCTRPKLAAA SNPSSENSDK PSCSPATSPP EDLSQTPGKL ESSQEELAEA  300
EDDDLSVSDM ALEDDFFEGL EDLAGPDHGE CIDDQFPASL EFPWLDKHTA TAGGGGGG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-21167244280Disease resistance protein RRS1
5w3x_D2e-21167244280Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV37408.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092990.11e-123WRKY transcription factor 22
TrEMBLA0A2Z7BUR40.0A0A2Z7BUR4_9LAMI; WRKY transcription factor 23
STRINGEOX958621e-101(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-61WRKY family protein