PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV36116.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 229aa    MW: 25914.2 Da    PI: 5.5237
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV36116.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.85.8e-061201591255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 RR++iN+++  L++++P +     k +  a +L ++++Y++sLq
  KZV36116.1 120 RREKINERLRCLQDIVPGC----YKSMGMAVMLDETINYVQSLQ 159
                 9*****************8....366999**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.112108158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.2E-4112164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-12120171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.69E-9120163No hitNo description
SuperFamilySSF474592.09E-12120171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MADHFLPGLQ NLDKSFTLYD IEPNIGLFSQ FTGLNPTTTP DSSSGLMNFH GSLISYPDAY  60
HNFLDSSSAA DPANLQNSPG LFNDPVVEKK RKSMDVNTPE SSTANSFQDS GNGIAWKDVR  120
REKINERLRC LQDIVPGCYK SMGMAVMLDE TINYVQSLQN QVEFLSMRLN AATTVYDFNS  180
DTDVMEALQV ISLHPQHLRF NIQIYTTNIH THIYIKFSVN KFRIMFCCF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV36116.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090153.19e-46transcription factor BEE 1 isoform X1
TrEMBLA0A2Z7BP751e-171A0A2Z7BP75_9LAMI; BR enhanced expression 1
STRINGMigut.D00641.1.p1e-39(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39712344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.22e-37BR enhanced expression 3