PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV35135.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 267aa    MW: 29574.1 Da    PI: 7.8899
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV35135.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.86.5e-403393363
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                e+alkcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+r+nk+sss
  KZV35135.1 33 EQALKCPRCDSNNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 93
                7899*****************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-292188IPR003851Zinc finger, Dof-type
PfamPF027011.4E-333490IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.5813690IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103874IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048364Biological Processroot development
GO:0005730Cellular Componentnucleolus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MEFILQEMAS EQTLESMLVC SKPQQEKKPR PVEQALKCPR CDSNNTKFCY YNNYSLSQPR  60
YFCKSCRRYW TKGGTLRNVP VGGGCRRNKR SSSSSSSSSS ASSKRSSQDQ PLIPIPNPMV  120
PCLAYDSSDL SLAFARLQKQ GQMGLDDYDF LNMGNHPSMP YNDHVLGFDA VRGGFHENPF  180
GFNQNPFNGN LGTEMAMGFE EINSGTESCS AGTATVKQEI CSAKEVHNKV LWGFPWQNIG  240
GDATTSSWNN AIGSTNWHGL LNSTPLM
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV35135.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089362.11e-89dof zinc finger protein DOF2.1
TrEMBLA0A2Z7BSM00.0A0A2Z7BSM0_9LAMI; Uncharacterized protein
STRINGVIT_06s0004g03420.t019e-84(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-39TARGET OF MONOPTEROS 6