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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV34918.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | B3 | ||||||||
Protein Properties | Length: 193aa MW: 22052.2 Da PI: 5.0292 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.4 | 2.3e-12 | 41 | 118 | 14 | 94 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 l+lp k a+++++ +++ l+d++g++W +++ + +g + kGW++F + ++L g +++F++++ s+f+ ++ KZV34918.1 41 EYLCLPPKLAATMKHM--VGQEAHLQDSTGKKWPITI--SYVDGVLAFHKGWNDFFSGHRLSIGQIMMFEHINGsSCFSVRI 118 4599*****9888544..4558***************..77788899************************97669995554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 3.14E-19 | 26 | 124 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 5.1E-17 | 27 | 122 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.082 | 28 | 122 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 8.80E-13 | 29 | 119 | No hit | No description |
SMART | SM01019 | 1.0E-5 | 30 | 122 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 5.5E-10 | 41 | 119 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MERAQLPKTS KAYKKRPELE KALLPDVTRF FKPIYGDDYS EYLCLPPKLA ATMKHMVGQE 60 AHLQDSTGKK WPITISYVDG VLAFHKGWND FFSGHRLSIG QIMMFEHING SSCFSVRIYG 120 IDACEILNFD QEIAEDGGEE RSSQSNTIEV VSQGNVGTIE NDVGLLYCLY FFMVYYYSFG 180 DTIIIIFIYS LYI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV34918.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2Z7BMV0 | 1e-143 | A0A2Z7BMV0_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2210 | 23 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49475.1 | 9e-12 | B3 family protein |