PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV34682.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bZIP
Protein Properties Length: 346aa    MW: 39260.7 Da    PI: 9.0079
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV34682.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.74.4e-076796434
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34
                 k +rr+++NReAA rsR+RKka++++Le+ 
  KZV34682.1 67 EKIQRRLAQNREAA-RSRLRKKAYVQKLETS 96
                5889********99.5************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.8E-57099No hitNo description
PfamPF141443.3E-24152226IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MTTPTARFAP PSTTGMYQIS PWDDAFEDHI MVAAEAEAML NDKSENTSDK SLEDNSEGNQ  60
ASKNNSEKIQ RRLAQNREAA RSRLRKKAYV QKLETSRVKL ARLQLELEQT RQLGLLRCRS  120
TTNIEIYGPI NSGAAAFEVE YGNWIDEQER KISELRNVLQ VPVSEPELGM IVQNVLNHYR  180
NLFRMKRDIA RSNAFYLVHG AWKTSVEWFF LWIGGFRPST LINVVMTQLG LSEQQVLKVR  240
TLRHSCVQAE DALSLGVDKL QQTLAQGFTY LGAGVGNYGA QMLSSLEKLE SLESFVLQAD  300
HLREQTLAQM SRLLTTHQAA KGLLISGEYF QRLRALNYLW CGRLKA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV34682.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097899.11e-163transcription factor TGA4 isoform X2
SwissprotQ391621e-103TGA4_ARATH; Transcription factor TGA4
TrEMBLA0A2Z7BJW70.0A0A2Z7BJW7_9LAMI; Uncharacterized protein
STRINGMigut.C00214.1.p1e-148(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.22e-93TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Canales J,Contreras-López O,Álvarez JM,Gutiérrez RA
    Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana.
    Plant J., 2017. 92(2): p. 305-316
    [PMID:28771873]