PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV33803.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 242aa    MW: 25737.6 Da    PI: 6.7506
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV33803.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1222e-382177460
      zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                ++ +cprC+stntkfCyynny+lsqPr+fCk+CrryWt+GG+lrnvPvGgg+rk + 
  KZV33803.1 21 EQFPCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGSLRNVPVGGGTRKAHP 77
                6789**************************************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-251881IPR003851Zinc finger, Dof-type
PfamPF027012.1E-322376IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.9012377IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102561IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MASESGDSTL SRQGTRKPEL EQFPCPRCES TNTKFCYYNN YNLSQPRHFC KSCRRYWTRG  60
GSLRNVPVGG GTRKAHPSNK RPRKTPITPT SAAPSSTAGL FSCSTEKDEP PQTETQTLEG  120
LMKNPGSGPL SGPPAEENLN EATGLPDSGN SSSWLGGHMG TSDGLLPMNM YGVGISAGLG  180
YGLTMLEWPL ENMNGGIGRS VSESPGGNPW QIADGGDDGG VAYGDYFSWP DLSVPAPAKV  240
LK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV33803.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083785.12e-63dof zinc finger protein DOF1.6
TrEMBLA0A2Z7BH821e-177A0A2Z7BH82_9LAMI; DNA binding with one finger 5 family protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.17e-35DOF zinc finger protein 1