PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31065.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HSF
Protein Properties Length: 371aa    MW: 41851.6 Da    PI: 5.0178
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31065.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.33.4e-35361282103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y+ +ed+++++l+sws  +nsf+v+d+++fa ++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+ +ll++i 
    KZV31065.1  36 FLTKTYDFVEDPSTNDLVSWSPGNNSFIVWDPQKFAMNLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQGHLLKNIV 123
                   9*********************99*****************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k++
    KZV31065.1 124 RRKTH 128
                   *9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004152.0E-6132125IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467856.67E-3532125IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.101.5E-3832125IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004473.3E-3136125IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.2E-203659IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.2E-207486IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043407599IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.2E-208799IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MKEEAYVGSS SLQYSDNEEP IPRPLEALIE GGPPPFLTKT YDFVEDPSTN DLVSWSPGNN  60
SFIVWDPQKF AMNLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQGHLLK  120
NIVRRKTHHS SSQTSNSQSL ASSVVEKNSA IDSEIDLFRL DECVIATEVM KHRQQQQTTL  180
SWLRTMKKRL EVAERKQKQT VSLLAKAIQN PTFLRPKLQQ EDEANGIADV VRNKRSRGIT  240
DHVSQNFGVN GLVYQQGENT NLSRVGNVGF QELSKNDVGI GYVKLEPQED VETTGFGVSG  300
LERLALGIKK PPVTSERNTL ENENSKKSFD DDGFWEELVS EGIDEIGTLD DVEGGDDLAE  360
HVELILSSNK R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A6e-283112712122Heat shock factor protein 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31065.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552814.11e-106heat stress transcription factor A-2c
TrEMBLA0A2Z7BAG70.0A0A2Z7BAG7_9LAMI; Heat stress transcription factor A-6b-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57224113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.17e-82heat shock transcription factor A6B