 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KZV30100.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 294aa MW: 33263.5 Da PI: 4.7768 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KZV30100.1 | genome | CNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.4 | 2.5e-18 | 55 | 106 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ eq+++Le+ Fe ++++ +++ +LA++lgL+ rqV +WFqNrRa++k
KZV30100.1 55 RRLGVEQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAIWFQNRRARWK 106
467789*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 130.1 | 8.9e-42 | 52 | 144 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrl eqvk+LE++Fe e+kLep+rKv+la+eLglqprqva+WFqnrRAR+ktkqlE+dy+ Lk++ydalk++ e+L++++e L++e++e
KZV30100.1 52 EKKRRLGVEQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYDILKASYDALKHSYENLQRDNEILTKEIQE 144
69***************************************************************************************9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
| GO:0030308 | Biological Process | negative regulation of cell growth |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MKRPNSSDSL GDLMSICPES TDEHDQENNP IYSGEFGTFV EGLVEESKHV MEKKRRLGVE 60
QVKALEKNFE VENKLEPDRK VKLAQELGLQ PRQVAIWFQN RRARWKTKQL ERDYDILKAS 120
YDALKHSYEN LQRDNEILTK EIQELKSKDG EDGKSESKVS AKEEATMVSD VEKGKLGHET 180
VACEHDNNHV SYIGNNGSSD STDSSAILNE DNSPHQFLDS KNGSGSTSSM NLSFKFSDFK 240
VSAASVVADA HNPHTQLQSV KIEEHNFLDE ESCSSLFSDA QAPTLHWYFS DEWN
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 100 | 108 | RRARWKTKQ |
