PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29384.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 339aa    MW: 37493.3 Da    PI: 8.194
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29384.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix57.43.9e-182399271
    trihelix  2 WtkqevlaLiearremeerlr.rgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
                Wt qe+++Liea++ ++er   r++      +++ +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++ 
  KZV29384.1 23 WTIQETMVLIEAKKMDDERRMkRSCtdqrakQAELRWKWVEDYCWRNGCFRSQNQCNDKWDNLMRDFKKVREYERRV 99
                *************966665552432444444*****************************************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.2481586IPR017877Myb-like domain
PfamPF138376.0E-122296No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MDLTVSGQEG KDTLGRDYRK GNWTIQETMV LIEAKKMDDE RRMKRSCTDQ RAKQAELRWK  60
WVEDYCWRNG CFRSQNQCND KWDNLMRDFK KVREYERRVV DAGVRGEGGA DKSYWKIEKN  120
ERRENGLPSH MLIQIYEALV DVVEKKDQTM VASALAAAPA SGGAASSNVD VPPNTGSGKS  180
SLMALGQPSI LPLPVQQQAP IMLLPLPPPA EPPIFPFSQP LPTVDSEDTS ECSESPAKRR  240
KKEGGGGGEA GTSGGPLGEI GNAISKSASI MAKAIQSREE ADGRRHREVV GLHERRLQIE  300
ESKAEIKRQG MSNLVDAINK LADSIQALAA NNKNQESFK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29384.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027088785.11e-115uncharacterized protein LOC113710150 isoform X1
TrEMBLA0A2Z7BC600.0A0A2Z7BC60_9LAMI; Methyl-CpG-binding protein 2-like
STRINGGorai.010G171500.11e-109(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA48212236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-53Trihelix family protein