PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28330.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 300aa    MW: 33843.1 Da    PI: 7.6385
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28330.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30134193159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +Cpvkkkv+rsa+dp+++++tYeg+H+h+
  KZV28330.1 134 VKDGYSWRKYGQKVTKDNPSPRAYYKCSFApTCPVKKKVQRSADDPSLLIVTYEGQHHHH 193
                 58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081125.763129195IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-30129193IPR003657WRKY domain
SuperFamilySSF1182909.29E-26133193IPR003657WRKY domain
SMARTSM007741.4E-34134194IPR003657WRKY domain
PfamPF031062.8E-25135193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MDDVSIDTTL TMDLKVYTSS HNTSVPPTTF DSSKSLPDLM EKLDEIKAEN NRLKDMVTDV  60
AKNYISLMKK CSEHQNLSRM SKTTSDHDTE NLGSHLNPRL YDDMSSPDRP KDVTSSKVSR  120
FNIRVDPSDM SLIVKDGYSW RKYGQKVTKD NPSPRAYYKC SFAPTCPVKK KVQRSADDPS  180
LLIVTYEGQH HHHRDCHRHR PSRAEIPAMM PPVLAGVRPS DSSSIEKGVS AKSIESTDYP  240
EVRTKTHCVT ASDYQKSDFQ QFLVQQMASS LTRNPGFRDK IAAAVTGRIL DDDILQDLEI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-201331921371WRKY transcription factor 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28330.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081961.11e-70probable WRKY transcription factor 40
TrEMBLA0A2Z7B2Y70.0A0A2Z7B2Y7_9LAMI; Putative WRKY transcription factor 40
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.16e-44WRKY DNA-binding protein 40