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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV26769.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | TALE | ||||||||
Protein Properties | Length: 435aa MW: 48918 Da PI: 6.3062 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.3 | 1.5e-09 | 355 | 392 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+++e+ LA+++gL+++q+++WF N R + KZV26769.1 355 FEHflHPYPNESEKLMLASQTGLSKNQISNWFINARVR 392 664459******************************88 PP | |||||||
2 | BELL | 85.8 | 5e-28 | 228 | 290 | 10 | 72 |
BELL 10 akLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 kLl ll+eV++rY+ y++ ++ ++ssFe++aglg+ k+Yt lAl+a+S+hF +L+ ai +qi KZV26769.1 228 LKLLALLDEVERRYEEYYNHMEELVSSFEVIAGLGAGKSYTLLALQAMSKHFCSLRKAILSQI 290 59***********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 9.4E-21 | 151 | 288 | IPR006563 | POX domain |
Pfam | PF07526 | 1.2E-30 | 157 | 286 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.034 | 333 | 396 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.26E-11 | 336 | 397 | No hit | No description |
SMART | SM00389 | 7.7E-10 | 336 | 400 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 2.1E-27 | 341 | 402 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.05E-17 | 342 | 403 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 9.8E-18 | 353 | 392 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence Send to blast |
MVSEDSPSDS NSSIVHQFII SNSIADQNQF SNQHFDAYGT DSVSDIPYAQ SLPLSIQCLG 60 DRSVDLHTSQ VSDESHASHG TRLMDLLGTS NESAHQAQRL SLSLGSVSCR QIDPGYLHTA 120 FDRMINDYSF VRNGFIAGSQ NQSCSISHGT ESFSAAIGSS KYLKPTQSLL EEMVGIGGKD 180 MDAGNQKYVE KLSHGGLKGF FRLASEIKAE FFSNELLSEK HGTFVSLLKL LALLDEVERR 240 YEEYYNHMEE LVSSFEVIAG LGAGKSYTLL ALQAMSKHFC SLRKAILSQI RVSKRKIEKD 300 MPRISARLSQ LSLFDQESRH HRIPLQQIIQ NSRQAWRPIR GLPENSVMIL RAWLFEHFLH 360 PYPNESEKLM LASQTGLSKN QISNWFINAR VRLWKPMIEE MYKEEFAESW TESDQVLARS 420 CTTREGAGDS AEELS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4xrs_A | 1e-16 | 342 | 399 | 1 | 58 | Homeobox protein Meis1 |
4xrs_B | 1e-16 | 342 | 399 | 1 | 58 | Homeobox protein Meis1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV26769.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011083617.1 | 0.0 | BEL1-like homeodomain protein 11 | ||||
Swissprot | Q1PFD1 | 4e-92 | BLH11_ARATH; BEL1-like homeodomain protein 11 | ||||
TrEMBL | A0A2Z7B4Y4 | 0.0 | A0A2Z7B4Y4_9LAMI; Uncharacterized protein | ||||
STRING | VIT_18s0001g13130.t01 | 1e-172 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8602 | 22 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75430.1 | 5e-90 | BEL1-like homeodomain 11 |