PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26036.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB_related
Protein Properties Length: 340aa    MW: 37479 Da    PI: 5.186
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26036.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-081446132
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32
                     +g+W++eEd +l+++++++G+g +W + +++ g
       KZV26036.1 14 KGPWSPEEDAKLKEYIEKHGTGgNWIALPHKAG 46
                     79***********************88888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.9E-19545IPR009057Homeodomain-like
SuperFamilySSF466892.65E-6844IPR009057Homeodomain-like
PROSITE profilePS500906.806938IPR017877Myb-like domain
SMARTSM007173.1E-613134IPR001005SANT/Myb domain
PfamPF002494.0E-71445IPR001005SANT/Myb domain
CDDcd001677.93E-51644No hitNo description
PROSITE profilePS500903.938113132IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.9E-19115136IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KHGTGGNWIA LPHKAGKYIY ICISVCVCVY  60
GYLLFSKFEE ILKDVGKVVD SGGSTISDQI LNMANSQMMR IESFAAFLLA LEAAQLPGRT  120
DNDIKNYWNT KLKKKILGVT KSHQLSSTII SNPIPKNPSI PSPYPSLQTQ FEYGNNATYP  180
TTISEDNSAF PTGAADLDSI SLNPTAHTVF QAQNHGQVSL IQYDDVKYYN NNTSHYIMFG  240
GEASCSSSDG SSNGENLNLN LQKYLYGNGI DEGDQKFLIG NPGGLGTDLH DKTEMDHFSE  300
NPMDYSIEEI KQLISSNSIC SDNVNLFVNG NKTKEPVLYY
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26036.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7AXC40.0A0A2Z7AXC4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.16e-35myb domain protein 36