PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV25723.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 473aa    MW: 51472.4 Da    PI: 6.3287
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV25723.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-09338385455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  KZV25723.1 338 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 385
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.01E-10332389No hitNo description
SuperFamilySSF474591.01E-16332400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-16334398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663334384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-6338385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10340390IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MDTEYFINAG ITSPQPLDLE AIIPMAWNAL NTESEQSLLT HTSSVEQYSH FESAFSPMLS  60
SPSASTSGLS TDAFVLQELI GKLGGGARNS GIFTPSATTA MAGGGYCRGI NSNTNDSCYN  120
TPLSSPPKLS FPILDSPKLG YSVPLSPLPS FSTDPGFAER AAKYSCFGRW SFNGRTPPFA  180
GNVNNAGLLP RTSTPLMENG KLSRASSSPS LKQDEPQLKS QNMRAPTNEH VSDSNEKSTV  240
SDQIPVAETG SKISNEQNSR KRKPVPRGQS REDGAKGDDY ANIKRSKSAE SGIIENGGAK  300
PEEEAVDENE KQKTNQKPPE PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL  360
VPGCNKVTGK ALMLDEIINY VQSLQRQVEF LSMKLASVNP GLDCNIDNVP KQMYPLDSSP  420
PSLLNVHHLH NPAPNRQPSQ NLSPSGFGFP EFGEGDLLSI FQMDQTCDVK VER
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV25723.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089038.11e-136transcription factor bHLH62 isoform X2
TrEMBLA0A2Z7AW590.0A0A2Z7AW59_9LAMI; Basic helix-loop-helix family protein
STRINGEMJ023811e-122(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10572383
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.16e-75bHLH family protein