PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24506.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 289aa    MW: 31214.8 Da    PI: 9.7594
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24506.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.31.7e-383794360
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                  ++kcprCds+ntkfCyynnyslsqPryfCkaCrryWt+GG+lrnvP+Ggg+rk k+
  KZV24506.1 37 PPSQKCPRCDSSNTKFCYYNNYSLSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKIKR 94
                56789**************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-253593IPR003851Zinc finger, Dof-type
PfamPF027013.8E-334094IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.8544094IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104278IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MHQGGSQEYL NHLQDRREPP PPQIPDFLGE ENHQQPPPSQ KCPRCDSSNT KFCYYNNYSL  60
SQPRYFCKAC RRYWTHGGTL RNVPIGGGCR KIKRPKPSPS SSPNSDMARG IQSSSPVRPS  120
QNLISAGVIS GQSIMRPSPP VNIPPPGNIS FYTGGAVLPS LAAMQPLPTR YSQVTAPVSF  180
GAGGSGQFGT LIQGMNLQSL KHPSPQQIQA QNILFPSQQS LILQRPISSW TQTSINRGIT  240
APSAASASFW SGAATGGNPT EGRDPAGSSL NPNQWPDHSH PCYDPSNNQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24506.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096324.21e-73dof zinc finger protein DOF3.1
TrEMBLA0A2Z7ASZ20.0A0A2Z7ASZ2_9LAMI; Uncharacterized protein
STRINGMigut.M01126.1.p8e-66(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21050.12e-33Dof-type zinc finger domain-containing protein