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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KZV23335.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
|
| Family |
WRKY |
| Protein Properties |
Length: 584aa MW: 63722.9 Da PI: 6.4468 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KZV23335.1 | genome | CNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 92.4 | 3.4e-29 | 249 | 306 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ ed +v+++tYeg+Hnh+
KZV23335.1 249 DGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCVEDMSVLITTYEGTHNHP 306
9**************************99****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006952 | Biological Process | defense response |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 584 aa
Download sequence Send
to blast |
METSLHKSLL ETVVKEEENR GSSNDDDGGF RDESILLQGE TKVERSSPTK SESRTASFVK 60
REQMEQLQLA KSEMVEVMEE NQRLRSYLDR ILKDYRTLQN QYKEAIQQEG NTKCGNEDSI 120
ASADQPEEAE LVSLSLGRSS SETTTKEGPR KMPTNERIRQ DDREGLALGL DCKFEVPKTS 180
SQVEYPSREN SLEEVRNETG DTTTTWSPHK SSTKNSRSDG EDDELLQQNH AKRARVSVRY 240
RCDTPTMIDG CQWRKYGQKI SKGNPCPRAY YRCTVAPSCP VRKQVQRCVE DMSVLITTYE 300
GTHNHPLPIS ATAVASTTSA AVSMLMSGSS TSGVGPSSSS IPTSSTTSTN LNGLNFYLPN 360
NSRSKPFYLP TTSISSSPSH PTITLDLTSP SSTSSPHLNR LGSNIPSRFS STNLNFSSLE 420
SSSLPVSWNN ATLGYGNKII QTPNSLSFGT QNSETLYHSF MQKNIRNPNV QQSDHTPDTI 480
AAATKAITSD PSFQSALAAA LTSLIGSGLA GASSSANQNG SDISSQNIKN TESFPILSSF 540
PTTSSVSNST SSQHGSLRFL SPSFPFTNTQ SKSNSPGDDR DHNV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj2_A | 4e-18 | 249 | 308 | 19 | 77 | Probable WRKY transcription factor 4 |
| 2ayd_A | 3e-18 | 249 | 308 | 16 | 74 | WRKY transcription factor 1 |
| 2lex_A | 4e-18 | 249 | 308 | 19 | 77 | Probable WRKY transcription factor 4 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
