PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV22762.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family CAMTA
Protein Properties Length: 1396aa    MW: 156246 Da    PI: 6.8979
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV22762.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1135.32e-42142233393
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 
                 +e ++rwl++ ei++iL  +ek++++ ++++rp sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v++l+cyYah+e n+t
  KZV22762.1 142 SEaQHRWLRPAEICEILRCYEKFKVSPQPPNRPISGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDMLHCYYAHGEGNKT 233
                 4449***********************************************************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143761.43137265IPR005559CG-1 DNA-binding domain
SMARTSM010762.1E-51140242IPR005559CG-1 DNA-binding domain
PfamPF038593.3E-36143233IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.106.5E-4551632IPR013783Immunoglobulin-like fold
PfamPF018331.1E-4552631IPR002909IPT domain
SuperFamilySSF812961.01E-14552638IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.5E-15729845IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484039.02E-16732843IPR020683Ankyrin repeat-containing domain
CDDcd002042.22E-12733841No hitNo description
PROSITE profilePS5029716.361740853IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500888.843782814IPR002110Ankyrin repeat
SMARTSM002480.0037782811IPR002110Ankyrin repeat
SMARTSM002483500821850IPR002110Ankyrin repeat
SMARTSM000150.023956978IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.81957986IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525405.58E-89581006IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006126.0E-4959977IPR000048IQ motif, EF-hand binding site
SMARTSM000153.3E-49791001IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.6889801004IPR000048IQ motif, EF-hand binding site
PfamPF006121.0E-49821001IPR000048IQ motif, EF-hand binding site
SuperFamilySSF816061.44E-6611451396IPR001932PPM-type phosphatase domain
SMARTSM003321.9E-8611451394IPR001932PPM-type phosphatase domain
Gene3DG3DSA:3.60.40.107.0E-7711471396IPR001932PPM-type phosphatase domain
CDDcd001438.11E-8411481396No hitNo description
PROSITE profilePS5174651.81311491396IPR001932PPM-type phosphatase domain
PfamPF004813.1E-5611581389IPR001932PPM-type phosphatase domain
SMARTSM003310.003711681396IPR001932PPM-type phosphatase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003824Molecular Functioncatalytic activity
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1396 aa     Download sequence    Send to blast
MLVEMGLYGY FELCTSGVSA SFEMVDRGDV IRLILDDREE GFRVCTVLVV FMRILCNVLL  60
SDKSFGKWEC FNIAPLHINI WVQFRCSGLF FISKGHVISG ILRTVVRDGY RSIEYHHHYN  120
LHSCPVRIIR IPPIGHVQQI LSEAQHRWLR PAEICEILRC YEKFKVSPQP PNRPISGSVF  180
LFDRKVLRYF RKDGHNWRKK KDGKTVKEAH EKLKVGSVDM LHCYYAHGEG NKTNSSSVRN  240
MVTESSYSEN GMLLRGTSPT STMSSAFEDA ESEDNHQASS RFHSYAESPL TDDIHSGLSS  300
FKDMIQHPGN QQFATPNYKL LSQGTSEGEF SGGGFISGSQ AIPDLASWQQ VYGLRVTGED  360
ADEQVSGCSL PMQTNWQPSY EDYSFHSNST AVNQDLILNL SHVPVSTLFE EESLQPNQKN  420
KMEHSYIFPD EQKVQFEQSN LQILSSDAEY RHAVNSNLDN VGSIHANQNC SFSLKMPIMN  480
GLQAEESLKK VDSFSRWVDK ELGEADELQL KSRTGSSWSL MGSEDDSNIP GQLQEYVETL  540
SPSISQDQLF SIIEFLPNWA YSNSETKVLV AGTFLKSKLE LAKCRWSIMF GEVEVPAVVL  600
ADGVLSCHAP PHNPGLVPFY VTSSNRLACS EIREFEFRFG ADQNSAASEH DATVRHLLQR  660
FENLLCVGPV QRQINSVEDV SEKQNVVNAV ISSIENEKQM DAKLESVSGM PQLNMIGKQL  720
LEKQLKEKFY DWLLQHVMEG MGLTSTDEMG QGVLHLAAAL GFNWALQPII VSGVSIDFRD  780
VNGWTALHWA SFYGREDTVA ALVSLDASPG AVTDPSSEHP MGRAPADLAA ASGHKGISGF  840
LAETSLTAHL SSLGVTDVQK DGSVNVSAVK AVQTLAERVA VPDSEKDVPD TLSLKDSLAA  900
VCNAAQAAAR IHQIYRIQSF QRKQLNRQGP DELSQDEKAA SLVTAKTSRF GHSAGAANAA  960
ATRIQKKFRG WRMRREFLLL RQKIVKIQAH VRGHQVRKKY KPIIWSVGIM EKVILRWRRK  1020
GKGLRGFRSD AMLKEQKTQV SLLHEDNYDF LKEGRKQAEE RTQKALARVK SMVQYPEARA  1080
QYRRLLTSAE VFRESKVWSL YLLPLLKMFK GLMILELMFT CIFVDFSELE AESSSFVSGK  1140
GRSNLGPVKY GVSLVKGKAN HPMEDYHVAK FVQFQRRELG LFAIYDGHLG DSVPTYLQKH  1200
LFSNILKEEE FWADPGSSIA KAYERTDEAI LSHNPELGRG GSTAVTAILI NCRQLWVANV  1260
GDSRAVLSRR GQAIQMTIDH EPNTERDDIE NRGGFVSNMP GDVARVNGQL AVSRAFGDKN  1320
LKSHLRSDPD ITNADIDDET ELLILASDGL WKVMSNQDAV DIAKKIKDPQ KAAKQLAMEA  1380
LKRDSKDDIS CIVIRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3nmv_B5e-301181139461310Protein phosphatase 2C 77
3ujk_A5e-301181139461310Protein phosphatase 2C 77
3ujl_B5e-301181139461310Protein phosphatase 2C 77
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV22762.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092424.10.0calmodulin-binding transcription activator 2
TrEMBLA0A2Z7AU680.0A0A2Z7AU68_9LAMI; Calmodulin-binding transcription activator 2
STRINGMigut.B00609.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.20.0ethylene induced calmodulin binding protein