PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV22733.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 492aa    MW: 54198.6 Da    PI: 6.1154
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV22733.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.92.7e-30224283159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  KZV22733.1 224 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 283
                 58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-32209285IPR003657WRKY domain
SuperFamilySSF1182909.55E-28217285IPR003657WRKY domain
PROSITE profilePS5081129.161219285IPR003657WRKY domain
SMARTSM007743.2E-37224284IPR003657WRKY domain
PfamPF031063.8E-27225283IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    Send to blast
MAREEGSESM EIDLSLKLLD SKEQENPNSQ ADESKLQEAE NRNLQEGADY KVFIKDELSS  60
LQKQMNRMKE ENKKLREAVE KTMKDYSDLK SKFASIQQNN QMKDSKITLS LNGTSNEDPN  120
EDPNRSPRII DIMSNQSVSS SSRADDAKES DELGLSLRIK VDSSKRRFGE DIERKENREE  180
NAGVRMMQGE VQSNNLPGIM SNISLPPNKR ARVSVRARCE SATMNDGCQW RKYGQKIAKG  240
NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA MASTASAAAA  300
SFMLLDPGNP FSDASLISSP FNNQAHYPFP SPTNPHMINP SSPYIQNLRA LNPSFLDPNK  360
GIVLDLTNNA GSSNPMAQLG YSWMQKQGNF NGSTLMNQYF PGTNKLVDEM GSKMCEDANK  420
SLLAENVSAI ASDPKFRVAV AAAISSLISK ESQAITHSTP PNPLVQRDGD KNDAGSGSPK  480
DNTWVLESSN AL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22211287176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV22733.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092693.21e-152probable WRKY transcription factor 9
SwissprotQ9C9F02e-76WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A2Z7ALZ90.0A0A2Z7ALZ9_9LAMI; WRKY DNA-binding protein 9 isoform 1
STRINGEOX974001e-129(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72872129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.14e-71WRKY DNA-binding protein 9