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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV22475.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 226aa MW: 25468.1 Da PI: 8.3898 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.7 | 4.1e-13 | 54 | 100 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er+RR+riNs +++Lr++lP + K +Ka+ L ++v+ +k+L KZV22475.1 54 ENHREAERKRRKRINSHLDRLRDILPCS-----SKTDKASLLAHVVQRVKEL 100 68*************************8.....6************999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.567 | 51 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.07E-13 | 53 | 114 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.7E-11 | 54 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.2E-13 | 54 | 111 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-10 | 57 | 106 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.13E-4 | 64 | 103 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 7.5E-4 | 138 | 189 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0009941 | Cellular Component | chloroplast envelope | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MQQRHSPEVS ALHRFLSENG LSYCFPAMQS FCCLPDVPEM VDRPDEARGL AAAENHREAE 60 RKRRKRINSH LDRLRDILPC SSKTDKASLL AHVVQRVKEL NQQTSQIKNS DQTIPSESDE 120 VSITKDDNFH GESVVKASLC CEDRVDLIPE LIGVLKSLNL IPLRAEMVTL GGRMKNVIIL 180 KGEKNSMDES GLFLRDELKR LVLSSANRGD GGNLKRRRRF DSFSGV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV22475.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022852366.1 | 8e-79 | transcription factor bHLH106-like | ||||
Swissprot | O80674 | 2e-49 | BH106_ARATH; Transcription factor bHLH106 | ||||
TrEMBL | A0A2Z7AKX8 | 1e-164 | A0A2Z7AKX8_9LAMI; DNA binding protein | ||||
STRING | Migut.J01640.1.p | 1e-70 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12841 | 17 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 1e-51 | bHLH family protein |
Publications ? help Back to Top | |||
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