PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV21909.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Dof

Protein Properties

Length: 275aa MW: 30492 Da PI: 8.9887

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV21909.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.5e-39	21	81	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks+ KZV21909.1 21 KEQALNCPRCHSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGTLRNVPVGGGSRKNKKSN 81 7899******************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	9.0E-29	14	79	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.3E-34	23	79	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.04	25	79	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	27	63	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009639	Biological Process	response to red or far red light
GO:0009845	Biological Process	seed germination
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MATTPDECTR AVMERKVRPQ KEQALNCPRC HSTNTKFCYY NNYSLTQPRY FCKSCRRYWT 60 EGGTLRNVPV GGGSRKNKKS NSVINSPSLS MATAPSVSSQ KQLPDLNPPS FASQNPKSLD 120 QGQDLNLGFP ASQDYYHVIP QFLEFPKIEN QNVINSIASP PSFNPTQLSA LNFLRNGIAV 180 RGLNPPPPIH MANTENNATP FATGFQFQEI KPSLPFSFDG FHGNSGRLSQ ENNINESLVF 240 PFGAMKRHSS TSTEADQSKE QESGNSNGYW NGILS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV21909.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022898416.1	1e-84	dof zinc finger protein DOF2.5-like isoform X1
Refseq	XP_027115492.1	1e-84	dof zinc finger protein DOF2.5
Refseq	XP_027163337.1	1e-84	dof zinc finger protein DOF2.5
Refseq	XP_027163338.1	1e-84	dof zinc finger protein DOF2.5
TrEMBL	A0A2Z7ARB7	0.0	A0A2Z7ARB7_9LAMI; Uncharacterized protein
STRING	XP_010252779.1	3e-76	(Nelumbo nucifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	3e-62	Dof family protein