PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21888.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 319aa    MW: 36196.3 Da    PI: 5.9615
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21888.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.12e-24120179258
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 +DgynWrKYGqK++ g+++pr+YYrCt++   gC ++k+v++++   ++++ +Y+g H++
  KZV21888.1 120 NDGYNWRKYGQKNILGTRHPRAYYRCTYRhtqGCLATKQVQQTDGSHSTFDLIYRGIHTC 179
                 7**************************998899*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-24108180IPR003657WRKY domain
SuperFamilySSF1182907.19E-23112179IPR003657WRKY domain
PROSITE profilePS5081119.692114177IPR003657WRKY domain
SMARTSM007746.7E-34119181IPR003657WRKY domain
PfamPF031064.2E-23120179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MEKVGTWDHG TVINELSQGR EFANQLQKEL TPAATSREAC AFLLERILYS YNNALTLLDH  60
MAFLGHGQHP SNNSVSSEGT HQSEASLTDS KEQVHVSKKR KTQPKRSEQV RVCSRTGVEN  120
DGYNWRKYGQ KNILGTRHPR AYYRCTYRHT QGCLATKQVQ QTDGSHSTFD LIYRGIHTCM  180
PEMIKHRGSF DAKKKEEKES MKSDLLVETQ EKYNEAENIL DFSFPTTPIA TENMGSRFCS  240
EPRSFMESSY SPPFLSPVTS ESYFSLSPGQ MNDFGVYPNL QSSESDFTEI MSSPTPLADF  300
PIADLDFLVD FVDFDTPFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-151191771674Disease resistance protein RRS1
5w3x_D2e-151191771674Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21888.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093555.11e-112probable WRKY transcription factor 41
TrEMBLA0A2Z7AKJ00.0A0A2Z7AKJ0_9LAMI; Uncharacterized protein
STRINGMigut.B01847.1.p4e-90(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55532237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.14e-35WRKY DNA-binding protein 30