PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV21771.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Trihelix

Protein Properties

Length: 339aa MW: 38539.6 Da PI: 6.6104

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV21771.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	72.6	6.9e-23	35	122	1	83
trihelix 1 rWtkqevlaLiearremeerlrrgk.....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 rWt+qe+++L ++++ e+r r+g+ +++p+W+ vs+++ ++g++r+++qC+++w+nl+ +ykkik++e++ +++ +s + + + KZV21771.1 35 RWTRQETMVLAQGKKIAEQRGRKGRrlgpeQAEPKWDFVSAYCIQHGVKRGAVQCRKRWSNLASDYKKIKTWESQVQNGGESYWIMPS 122 8*******************98445555*******************************************9999999887655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.249	28	97	IPR017877	Myb-like domain
Pfam	PF13837	2.0E-10	34	112	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MATRPNSTQE NEITSGGQSS LERSDDRSKT QRHPRWTRQE TMVLAQGKKI AEQRGRKGRR 60 LGPEQAEPKW DFVSAYCIQH GVKRGAVQCR KRWSNLASDY KKIKTWESQV QNGGESYWIM 120 PSDLRRERKL PGYFDQEIYH VLDGQEFTNA AYQLALVTTS AGEIYGAEGE EESQETETEV 180 SDGTPAAADN GSLQDIEIGS TEKENIPEDG KADTIPSPVP ISEMRYQPYH QAYINPGTEN 240 KRHSGPQFWQ RSTYHEGAKR RRHTSSSCQN FNVETQLIKA LEKNISLLNS QLQEQKIISQ 300 MDREQQKDCH NVLVTALAKL TDALEKIGDK LQHQETKDA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV21771.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011083005.1	1e-115	trihelix transcription factor ASR3-like
TrEMBL	A0A2Z7AJ19	0.0	A0A2Z7AJ19_9LAMI; Trihelix transcription factor GT-2-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1786	24	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-68	Trihelix family protein