PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21505.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 423aa    MW: 45455.3 Da    PI: 5.4203
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21505.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like986.5e-31262315154
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                 k+r+rWtpeLHe+Fveave+LGGse+AtPk +l+lmkv+gLt++hvkSHLQ  R
  KZV21505.1 262 KQRMRWTPELHEAFVEAVEKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQIQR 315
                 79*************************************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.3259319IPR017930Myb domain
SuperFamilySSF466891.74E-15260315IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-27261315IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-23262316IPR006447Myb domain, plants
PfamPF002491.1E-8264312IPR001005SANT/Myb domain
PfamPF143791.7E-9310338IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MEAKPALSVQ RSSASQLGTF GTSGAVPPSF PFLPTSFEGT HPKCSDSLRV SLEKESMQHP  60
SSVVSSSFSS SGAVGHIFSS PSGFSTDLQF SSQQLEGKHP RQSPFISQSF HSGKPVILPY  120
SVGSEALRSS ASSHCNNQNE SWCTDTVPEF LNFPATLQNC PLDGSDSGII SSQSEDLSKQ  180
NDWQDWADQI IVDNDDLTSH LNELLADANV AEPELKVLSQ IPKDSTNYST LHPHASQQLS  240
AKPGETCAIS GQSPPSNAAP AKQRMRWTPE LHEAFVEAVE KLGGSERATP KGVLKLMKVE  300
GLTIYHVKSH LQIQRNLQLR IEEQGRQLQM MFEKQYKSGP DLLKGVSSTN ESPSKELTEV  360
PPKSPSQETS TREANNSIAG GVSTNLAAAS AETSRPVAGI PEANDAGMAQ SESPPSKRAK  420
VDE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-27261320160Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21505.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020550480.11e-147protein PHOSPHATE STARVATION RESPONSE 1 isoform X1
TrEMBLA0A2Z7AI670.0A0A2Z7AI67_9LAMI; Transcription factor
STRINGMigut.D00466.1.p1e-129(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27532349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.18e-47phosphate starvation response 1