PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

KZV21486.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

C2H2

Protein Properties

Length: 184aa MW: 21578.2 Da PI: 5.5171

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV21486.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	31	53	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C +C++ F + L H++ H KZV21486.1 31 YECVYCKRGFDSAQALGGHMNIH 53 99*******************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	3.85E-6	29	58	No hit	No description
Pfam	PF13912	2.3E-6	31	55	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	10.99	31	58	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	33	53	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence Send to blast
MESNYHQEES TNSSEEVEQD NDFDLGMGRS YECVYCKRGF DSAQALGGHM NIHRKDKSRN 60 KATPRKPEDN NYTGPRLYQQ TPDSRKDHFS HHDHHIIDAT HFQEYAGSSG ATRPLYGGHD 120 NEQQQQIYRR THDFDRYTNQ FSRGDWRAGL EYSPLIVEDV EMNRRVENNS KEELDLELRL 180 GYDS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV21486.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011080295.1	3e-42	transcriptional regulator SUPERMAN-like
TrEMBL	A0A2Z7AIW7	1e-136	A0A2Z7AIW7_9LAMI; Nucleic acid binding protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2136	21	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06070.1	1e-13	C2H2 family protein