PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV20976.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Nin-like
Protein Properties Length: 861aa    MW: 96080 Da    PI: 6.5057
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV20976.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK90.71.1e-28540590252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  k+i+l++l+++F++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++
  KZV20976.1 540 DKTITLQVLRQHFAGSLKDAARNLGVCPTTLKRICRQHGIQRWPSRKIKKV 590
                 689**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.2529610IPR003035RWP-RK domain
PfamPF020429.4E-26542590IPR003035RWP-RK domain
SMARTSM006661.2E-24762845IPR000270PB1 domain
PROSITE profilePS5174525.319762845IPR000270PB1 domain
SuperFamilySSF542772.64E-22763844No hitNo description
CDDcd064077.70E-37764840No hitNo description
PfamPF005647.8E-17764843IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2404.2E-22764842No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 861 aa     Download sequence    Send to blast
MEENVVPLNS VLGGVPSDYF MMDLDYMDQL FLEGCWLETH GTEFLNFDAP TPISPFEPSF  60
LWSNLEANNV EFDGVSSKEE RQRSSFPENV SISQAQDVLG PLCQAENYAI EGSEPRKRLW  120
FGPRASTSVT DRLIQALGYI KDLSKDKGAL IQVWVPVNRG GKRVLTTNDR LASVDLNCPS  180
LAQYGEISRS FEFPTEEDSK ESWGLPGRVF RNKTPEWTPD VRFFTTHEYP RVGHAQKYDI  240
CGTLAVPVME QGSRTCLGVI EVVLTTRKLK YGAELESVCK ALEAVDLRTS EVPTAQNVKT  300
SDLAYRTALP EILEVLKAAC KAHGLPLAQT WVPCILQGKG GCRHSDDNLE TCVSTVDSAC  360
YIGDSRIQGF HEACSEYHLL KGEGIVGKAF RTNQPCFWPD ITSFSKTEYP LSHHARMFGL  420
QAAVAIRLRS ICTGSADFVL EFFLPIDCKD LEEQRKMLTS LSHVIRNVCR TLRVVTDQEL  480
QENFTFPDEE LIISPAPRFS QRPGSNSREG VTFATKSSTS GDDSSLYTSR IEEKRRTKAD  540
KTITLQVLRQ HFAGSLKDAA RNLGVCPTTL KRICRQHGIQ RWPSRKIKKV GHSLQKIQRV  600
IDSVQGASGV LQIESFYSNF PELASPNASK TTHFSNFKST DHVHIEVRPE SYHLSPQAAA  660
SLSPSTSCSQ SSGSSGSCSG GTQPKSFSSS IVRNEESVSK DEYVNGMFKR ARSDANLHLS  720
SDEPKLLQRS QSQTSLYANV EPENNSPATP VNGCIKAQER VCPRVKVTFG EEKIRFRIQH  780
SWGYKELYQE ICRRFGIGDT QGYHLKYLDD DAEWVLLTCD DDLVECVDVC HSSQSDTIKL  840
QLVADSQTHF GSSFGSRDHH S
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00154DAPTransfer from AT1G20640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV20976.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074088.10.0protein NLP5-like
RefseqXP_011074089.10.0protein NLP5-like
RefseqXP_020548089.10.0protein NLP5-like
RefseqXP_020548090.10.0protein NLP5-like
SwissprotQ9LE380.0NLP4_ARATH; Protein NLP4
TrEMBLA0A2Z7AHE10.0A0A2Z7AHE1_9LAMI; Uncharacterized protein
STRINGMigut.N02963.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.10.0Nin-like family protein