PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV19026.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 305aa    MW: 34026.1 Da    PI: 6.3449
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV19026.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.1e-09127174455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  KZV19026.1 127 SHSLAERARREKISKKMKCLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 174
                 8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-16121190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.91E-9121178No hitNo description
PROSITE profilePS5088815.237123173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-17123191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.9E-7127174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-10129179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MDVISELEKQ SKTIRRLYHE PTNSCLHQEI DQMSLHCVLD HQEMVSNYWQ KAKPGNESTI  60
DSCSIKKRKP EQFDVKEYSG DVKSEITAKA DRETSENTPS KANSKTSEVQ KTDYIHVRAR  120
RGQATDSHSL AERARREKIS KKMKCLQDLV PGCNKVTGKA GMLDEIINYV QSLQKQVEFL  180
SMKLATSNQR FDSGVDNLFA ESTCFDYDPV QQQEGATSCG ASTDMALDQS QILMVPQISI  240
PDPFLDSSCN TPYRNPSHSG VGSVHSCAPS PLEACQEPLI VRATSGTGEH SPPSFEPRTS  300
HYFIT
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV19026.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847836.14e-77PREDICTED: transcription factor HBI1-like
RefseqXP_012847837.14e-77PREDICTED: transcription factor HBI1-like
TrEMBLA0A2Z7AIR80.0A0A2Z7AIR8_9LAMI; Uncharacterized protein
STRINGMigut.O00889.1.p2e-76(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.26e-51BR enhanced expression 2