PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

KZV17211.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Dof

Protein Properties

Length: 276aa MW: 30610.8 Da PI: 8.7579

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV17211.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.2	2e-39	27	88	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss KZV17211.1 27 KEQALNCPRCSSINTKFCYYNNYSLSQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKRSSS 88 7899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-24	20	76	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.9E-34	29	85	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.891	31	85	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	33	69	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MDTNAQWPQG IGVVKPQVDQ KKPRPQKEQA LNCPRCSSIN TKFCYYNNYS LSQPRYFCKT 60 CRRYWTEGGT LRNVPVGGGS RKNKRSSSTV LPPVNPSKKQ LVPSPPDFSP QNSKIHEGQD 120 LNLAYNPSHY NGFPEFVPFP FGSDAKNLES QNPNNSSSNP SYFPVMEFLK SGISSRGSLG 180 SFMTNIPPVS DNSNSVFSSC NNFPVHGFKS SLGFSLDHGA DNQNGYGNLQ DHANSSRLLF 240 PFEELKPVST NEQFEQDRGQ AESNGYWNGM LAGGSW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV17211.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011075948.1	1e-104	dof zinc finger protein DOF4.6-like
TrEMBL	A0A2Z7A7F5	0.0	A0A2Z7A7F5_9LAMI; Uncharacterized protein
STRING	Gorai.004G122800.1	5e-88	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	5e-40	Dof family protein