PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV17211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | Dof | ||||||||
Protein Properties | Length: 276aa MW: 30610.8 Da PI: 8.7579 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.2 | 2e-39 | 27 | 88 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss KZV17211.1 27 KEQALNCPRCSSINTKFCYYNNYSLSQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKRSSS 88 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 8.0E-24 | 20 | 76 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.9E-34 | 29 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.891 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 33 | 69 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence Send to blast |
MDTNAQWPQG IGVVKPQVDQ KKPRPQKEQA LNCPRCSSIN TKFCYYNNYS LSQPRYFCKT 60 CRRYWTEGGT LRNVPVGGGS RKNKRSSSTV LPPVNPSKKQ LVPSPPDFSP QNSKIHEGQD 120 LNLAYNPSHY NGFPEFVPFP FGSDAKNLES QNPNNSSSNP SYFPVMEFLK SGISSRGSLG 180 SFMTNIPPVS DNSNSVFSSC NNFPVHGFKS SLGFSLDHGA DNQNGYGNLQ DHANSSRLLF 240 PFEELKPVST NEQFEQDRGQ AESNGYWNGM LAGGSW |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV17211.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011075948.1 | 1e-104 | dof zinc finger protein DOF4.6-like | ||||
TrEMBL | A0A2Z7A7F5 | 0.0 | A0A2Z7A7F5_9LAMI; Uncharacterized protein | ||||
STRING | Gorai.004G122800.1 | 5e-88 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61850.4 | 5e-40 | Dof family protein |