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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV15174.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | GRAS | ||||||||
Protein Properties | Length: 507aa MW: 58903.9 Da PI: 4.549 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 99.9 | 3.7e-31 | 126 | 506 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lL++ Aea++++++ l +++++ + ++p g + R+ y+ + L + l+ + + s+ aa+k+f+++ P+ +f+hl+aN+ KZV15174.1 126 LHLLVAYAEAIDKQETLLSGVIVEHMIKKVNPVGGIVDRIMYYMFRHLYKESDY----LV-----K----ECLSNFYAAFKAFYQILPYGRFAHLVANS 211 79*****************************************98766554443....22.....2....23678999********************* PP GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl.vak.rledlel 191 aI e + ++ + +H+ Dfdi++G+Q Ll+++ + + ++R+ v e g s + eet+ r+ + A+++g+++ + + ++ +++ ++ KZV15174.1 212 AIIENMPSHvDIIHVFDFDIGEGIQISFLLEEMKDHR--CKEVRVISVRLGEDGeffshSIWNFEETKIRICNEARSCGIDMTVEEVgFMDlGCKMKNI 308 *******998999********************9654..334555555544443445559999**********************98322223333344 PP GRAS 192 eeLrvkpgEalaVnlvlqlhrll..desvsles...erdevLklvkslsP....kvvvvveqe...adh.nsesFlerflealeyysalfdsleaklpr 277 e+ ++ + n+++ l ++ +++ ++ + +++L+ v++ + +++ + + ++ n ++ + + + ++ + a+++sle ++p KZV15174.1 309 EKECYGRKSWHIFNCMVGLPHMGriRSKKCVLKflqVAKDFLQNVRNCETgfskGIITYGDGDtwcGNMtNCVDYTTFLDSNVRRFRAFLESLEFSFPY 407 44444449999******99998733223333334547889*****98654222279*******4443333555888888899****************9 PP GRAS 278 es.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve...eesgslvlgWkdrpLvsvS 371 e+r+ +E ++++ +++ ++ e ++++ + + +e+ G++ ++lsek + +a+ ++r+ + + y v e+++++ l W++ pLv vS KZV15174.1 408 RLgEARVALESLFVAPYFSSITLERKWE---ENKQCGGVDQLVESLGMEGLRLSEKCMLEASEMVREGDdNSPYGVRfmsEKKNEMGLHWRGTPLVRVS 503 9868888888887777777766666665...8888899999**************************99666698887779999*************** PP GRAS 372 aWr 374 +W+ KZV15174.1 504 CWK 506 **8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 14.006 | 99 | 482 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 1.3E-28 | 126 | 506 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence Send to blast |
MSDMYDIDQC IWPHSNNSDS FFMDDDEYRY AFSPPFFATD ASLEISSTMQ QYLGSIFSDE 60 CMEFPRLVEE VHEDYSREDL QIDFDEFDHI FEDDMDHDRA MDVPHASMQI SQLLEEEEID 120 SEGCLLHLLV AYAEAIDKQE TLLSGVIVEH MIKKVNPVGG IVDRIMYYMF RHLYKESDYL 180 VKECLSNFYA AFKAFYQILP YGRFAHLVAN SAIIENMPSH VDIIHVFDFD IGEGIQISFL 240 LEEMKDHRCK EVRVISVRLG EDGEFFSHSI WNFEETKIRI CNEARSCGID MTVEEVGFMD 300 LGCKMKNIEK ECYGRKSWHI FNCMVGLPHM GRIRSKKCVL KFLQVAKDFL QNVRNCETGF 360 SKGIITYGDG DTWCGNMTNC VDYTTFLDSN VRRFRAFLES LEFSFPYRLG EARVALESLF 420 VAPYFSSITL ERKWEENKQC GGVDQLVESL GMEGLRLSEK CMLEASEMVR EGDDNSPYGV 480 RFMSEKKNEM GLHWRGTPLV RVSCWKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV15174.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011095221.1 | 1e-150 | nodulation-signaling pathway 2 protein-like | ||||
TrEMBL | A0A2Z7A106 | 0.0 | A0A2Z7A106_9LAMI; Nodulation-signaling pathway 2 protein-like | ||||
STRING | Migut.J00120.1.p | 1e-130 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5361 | 19 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08250.1 | 3e-11 | GRAS family protein |