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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV15173.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | GRAS | ||||||||
Protein Properties | Length: 505aa MW: 57726.2 Da PI: 4.4694 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 147.2 | 1.5e-45 | 143 | 504 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 +lL + Aea+++g++ la+ l + +e s g++m+R+a+ + +r yk ++++ + ++ + + a++++++ P+ +f+hltaN+ KZV15173.1 143 HHLLKAYAEAMENGEKDLADVLAKSTNEKTSAMGSTMERVAFSL--------FR-----YKEKQTEQMQLESINNLVEAFRVLYQGLPVGRFAHLTANS 228 79999************************************964........45.....45555666666668889999******************** PP GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL.. 194 aI a+ ++ + vH+iDfdi++G+QW++L+++L+ ++++ l +T v+ + ++eet++rL+ A++ + +++ + k++edl ++eL KZV15173.1 229 AIIGAMPSDaDLVHVIDFDIGEGIQWAPLMESLSWKNKS---LMLTSVKLDGERtsTFCNIEETKKRLQGHAKQYNCRLQVEE---KSMEDL-VNELtr 320 ******9987999*********************98655...888888875554557789********************987...667777.555533 PP GRAS 195 rvkp....gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk...vvvvveqeadh..nse.sFlerflealeyysalfdsleaklpres.eer 282 r+k+ + l+ n+++ l ++ +++ ++ e+Lk+ k+l +k ++++ + e + n+ s+ f + l++y alf+sle++lp+ +r KZV15173.1 321 RMKKrgeeKNWLVFNCMVGLPHMARRRPRSQ--VLEFLKVAKELLSKfagILTLGDGEEGYglNTCsSYQSFFDKLLRHYQALFESLEKNLPSYLaAAR 417 22225555888************95555444..599********9876669***99886654466426666667789***************987799* PP GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373 +++E +l++ ++ ++ e+++k ++ ++ G++ ++ls++ ++a+ ++++ ++ ++v+ +++++vl Wkd pLv vS W KZV15173.1 418 TTIESLFLAPFLSPFDWF------QDWEEKMKSQNVQDRIGLEGLELSKESLAEAREMVNEREGP-FKVKvegYREHEMVLEWKDTPLVRVSTW 504 ******999987765444......455566777889999***********************966.9998445559****************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 21.169 | 116 | 483 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 5.4E-43 | 143 | 504 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence Send to blast |
MLQPGILMPS GPIFDLTFSN QYVNCNQEME FCDIDYHDFS SSFASHSESS VISSNSCDQT 60 MFQDEFLIHH IMSSSMEGVE TIFSSEDLME VCEWINETDH DSPSGDQESS PCISFESDEN 120 SDVGLSLSLP ETEMELDDEL RLHHLLKAYA EAMENGEKDL ADVLAKSTNE KTSAMGSTME 180 RVAFSLFRYK EKQTEQMQLE SINNLVEAFR VLYQGLPVGR FAHLTANSAI IGAMPSDADL 240 VHVIDFDIGE GIQWAPLMES LSWKNKSLML TSVKLDGERT STFCNIEETK KRLQGHAKQY 300 NCRLQVEEKS MEDLVNELTR RMKKRGEEKN WLVFNCMVGL PHMARRRPRS QVLEFLKVAK 360 ELLSKFAGIL TLGDGEEGYG LNTCSSYQSF FDKLLRHYQA LFESLEKNLP SYLAAARTTI 420 ESLFLAPFLS PFDWFQDWEE KMKSQNVQDR IGLEGLELSK ESLAEAREMV NEREGPFKVK 480 VEGYREHEMV LEWKDTPLVR VSTWM |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV15173.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011095222.1 | 0.0 | nodulation-signaling pathway 2 protein-like | ||||
TrEMBL | A0A2Z7A221 | 0.0 | A0A2Z7A221_9LAMI; Nodulation-signaling pathway 2 protein-like | ||||
STRING | Migut.J00119.1.p | 1e-141 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5361 | 19 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08250.1 | 2e-22 | GRAS family protein |