PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV15104.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 322aa MW: 36711.4 Da PI: 7.7492 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.2 | 1.7e-09 | 165 | 212 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L++l+P + +K Ka +L + ++Y++sLq KZV15104.1 165 SHSLAERVRRERISERMKLLQTLVPGC-----EKvTGKALMLDEIINYVQSLQ 212 8*************************9.....67699***************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 7.85E-17 | 159 | 229 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.12E-10 | 159 | 216 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 4.1E-16 | 161 | 229 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.408 | 161 | 211 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 9.5E-7 | 165 | 212 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-9 | 167 | 217 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MAAFSSIQHH PFLLDSDNYI DPHNALFSHL YEPQNFDRST KVITAISNNE AASVTNKNSM 60 DSSSIVTHFY YKQDDDDHHN YYSNHLAQKP IPIGKKRRCK EGSSSNSAQS KDMREMKAKK 120 ERGKMKNNSP ETKKKEKKNE KKEAEEVPPT GYIHVRARRG QATDSHSLAE RVRRERISER 180 MKLLQTLVPG CEKVTGKALM LDEIINYVQS LQNQVEFLSM KLASLNPMLY DFGMDLESFM 240 TRPDQNLSSL PSPLPNLQQC NPTTLHSYPI LDNSLVFQQS QIPNPLPIEG DRSEVLMEVD 300 DPSPKINMNQ SAGFSYSLFS FH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 99 | KKRRCK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV15104.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011083355.1 | 1e-100 | transcription factor bHLH137 | ||||
TrEMBL | A0A2Z7A0U2 | 0.0 | A0A2Z7A0U2_9LAMI; DNA binding protein | ||||
STRING | XP_002511110.1 | 3e-83 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4116 | 23 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 1e-52 | bHLH family protein |