PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14626.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 787aa    MW: 87884.4 Da    PI: 6.3168
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14626.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.25e-172379557
                SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 ++t+eq+++Le++F ++++p++++re+L ++     g++ +q k+WFqN+R +ek+
  KZV14626.1 23 IRYTDEQIRVLERAFSECSNPDRSQREQLKHQHpilnGIDNKQLKIWFQNHRSREKQ 79
                589*****************************999********************97 PP
2START110.13.4e-351633553190
                 HHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   3 aeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 a ea +e+++ka+ ++  Wv ++ ++++g++++  +  s    g a+ra+++v+ ++ ++ e+l d++  W++ ++k+++l+v + +  g+++l ++++
  KZV14626.1 163 AAEARNEFLAKATGTAIEWVPFPvQELKGKISVGGVYVSYRGVGVAARACVLVPFEPLKVIEILKDTP-SWSRKCRKQDVLAVYQANncGTVELVYTQY 260
                 78999******************99999999999996665579***************6666666666.****************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksgla 190
                 +a+++l++ Rd +++Ry+  l++g++v+++ S++  +++ +    +++vRa++l Sg+li p+++g s v  v h dl+ +++++++r+l++s+  
  KZV14626.1 261 YAPTTLACaRDLWTLRYTSILEDGTFVVCEKSINAGSNVLSstaAPEFVRAKMLASGYLIYPCEGG-SIVNLVVHLDLEVSSVPEVVRPLYESSEL 355
                 **************************************9878889********************9.************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007115.3051680IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.1E-141782IPR009057Homeodomain-like
SuperFamilySSF466891.15E-131882IPR009057Homeodomain-like
SMARTSM003895.4E-101884IPR001356Homeobox domain
CDDcd000862.11E-132181No hitNo description
PfamPF000461.3E-142379IPR001356Homeobox domain
PROSITE profilePS5084822.08152380IPR002913START domain
SMARTSM002347.5E-17161371IPR002913START domain
SuperFamilySSF559612.61E-22162349No hitNo description
PfamPF018529.1E-32163358IPR002913START domain
Gene3DG3DSA:3.30.530.203.3E-16206344IPR023393START-like domain
PfamPF086701.9E-22658786IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    Send to blast
MARTDNHVAA GRRGREEGHE KHIRYTDEQI RVLERAFSEC SNPDRSQREQ LKHQHPILNG  60
IDNKQLKIWF QNHRSREKQK KEHGVILAEN TKLQLAMKLL REDNNVLLKR VAELVRETDC  120
LRSQILTSQI TTVNMTKQAS EPQPHSPQRS GDADDDKGVL VLAAEARNEF LAKATGTAIE  180
WVPFPVQELK GKISVGGVYV SYRGVGVAAR ACVLVPFEPL KVIEILKDTP SWSRKCRKQD  240
VLAVYQANNC GTVELVYTQY YAPTTLACAR DLWTLRYTSI LEDGTFVVCE KSINAGSNVL  300
SSTAAPEFVR AKMLASGYLI YPCEGGSIVN LVVHLDLEVS SVPEVVRPLY ESSELIAKDM  360
IFPALQCIEQ LAREATSGKT NSHPVESVFV RSFCQKLSRG FNDAVNGFNE DGWQLMNMDA  420
PENSIISMKR TNGLGIDTKY DGVICVKTTV LLQNIFPAKL VGLLKDHRST WMDFNFDDKL  480
EEIIRAPYFA FPGVNTHNLL DKAVPLGHTH QGEEVLEVIQ FESFANLHDN GSSVELYHLQ  540
VVNGMESMGN SCFGASSEFI FAPIDKTLSN EAVLLSSGFR VLSVGSKRVC SNPSLSSIKL  600
FSAVNNPCSM MILAFQFPFE TRFEEDVRSI ALEYIQHVIS SVKNIVQGVI PSGSNPERFL  660
GVELCDFRRL STCSFFELVQ THPSAILCFS FASVPMCLYA NQAAVDMLET GLHNLQTFAL  720
DQILDVSIMY SVIPTILEQG YAALPHRCCR STMDRRISYE QGVAWRVEGL DGSCHCFAAA  780
FINWSFD
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14626.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076983.10.0homeobox-leucine zipper protein REVOLUTA-like isoform X3
TrEMBLA0A2Z6ZZH20.0A0A2Z6ZZH2_9LAMI; Homeobox-leucine zipper protein REVOLUTA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1565734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein