PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV14558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 25267.8 Da PI: 9.22 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.9 | 4.2e-14 | 53 | 105 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +r+ h e Er+RR+++ + ++ Lr+llP ++K s ++ ++Av+YIk++q KZV14558.1 53 KRVLHRETERQRRQEMANLYASLRTLLPLeY---IKGKRSVSDHMQEAVNYIKHMQ 105 7999*************************77...*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.31E-14 | 51 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.164 | 52 | 104 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.2E-11 | 53 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.3E-10 | 53 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.08E-11 | 53 | 109 | No hit | No description |
SMART | SM00353 | 1.9E-5 | 58 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MFPLQPSGEL VFVAPSSHPD EVILHNQIAN HALPDNNNIK ETRRKRIDEC NTKRVLHRET 60 ERQRRQEMAN LYASLRTLLP LEYIKGKRSV SDHMQEAVNY IKHMQKRIQE LKMRREKRSN 120 FSGTKIGSSN SDEKSVNFVE VTQGRDGVEI LISSGCNSFG LGPGLSGVLQ ELQASGLNVV 180 SCLSTKENDR RFLHRIHAEL VDDVKHIEIP VMQERLIHLI N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 52 | 64 | KRVLHRETERQRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV14558.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022866517.1 | 2e-59 | transcription factor bHLH36-like | ||||
Swissprot | Q9FLI1 | 3e-40 | BH036_ARATH; Transcription factor bHLH36 | ||||
TrEMBL | A0A2Z6ZZ10 | 1e-161 | A0A2Z6ZZ10_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA598 | 24 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 1e-42 | bHLH family protein |