PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ55493.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family AP2
Protein Properties Length: 1361aa    MW: 129020 Da    PI: 8.4324
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ55493.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.96.6e-10310347143
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAa 43 
                 s++kGV+ ++++gr++A+I++       ++ ++g++gt  eAa
  KXZ55493.1 310 SRFKGVSLYRRTGRYEAHIWHE-----GRQLHIGTYGTDLEAA 347
                 789******************5.....4**********88998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.7E-5310347IPR001471AP2/ERF domain
SuperFamilySSF541715.82E-7310383IPR016177DNA-binding domain
PROSITE profilePS510329.967311382IPR001471AP2/ERF domain
SMARTSM003801.7E-8311388IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1361 aa     Download sequence    Send to blast
MTASAHPMEA AAPAAGADKP ATGVPRRQSE GGVGVSRPAS DAVATTAAAA ATAAKLAAAA  60
ATTSLITALP IKAAGSSPAT ASARQQQQQK PSSPIQHHHQ SSLGGVPPSP AAQAAAAALA  120
GMAVSAVGRF PLGAGSAGAN PPSMRSAAAN WAPSAALAPQ GAGSRPVRRC ESSGGGDGDD  180
SSISLRWAAA KSGGGAAAAG VRVPRALTAP ASTAAELPPL DSVAELLPPP PPQQQLRQSQ  240
TRRVARRWTA GVTAAAAAAA NSGLAPFIGG GGAGDESAAA AAAAAAAAAA AAAAVASTAA  300
PGRGPRNRSS RFKGVSLYRR TGRYEAHIWH EGRQLHIGTY GTDLEAALVG GRGPRESGAG  360
RGRAYDRVSM YLRGTSAALN FPTEAAASAA AAAVAAMSAA MQGVGVGFGV GGSVGDGSAG  420
GSVGGAADAI AAGAGAGSTG VSPFERGAMV AAAAGWQDWQ GTAPTIAEER PAVGSPAPQT  480
CNGAAQEAPG VHALADAAAR LEAAEDEDMP DVGAASAATA TATTVTATTA DSSGGVGGGG  540
SSRDAHGGGG HSAHLLGQLG APNGGRIGAF MGGGGAGRGL TAVSKPWPSE LAHGWALSGG  600
GGGGGGGGGA AVLLGGNGHG GSDSGGSGGG PVRYVRRRIS AVESVTAPLL PRPAAPSALW  660
RAVSSDRLRP LAEAEAGSGM AGHMPRLPTN VPGSLLDGPY SGAGGGGDGR TACPPTVPGP  720
LERTASWVRW QAATAKEYGA WPPGAFPAAT AAALQPAPPL DRNRSGGSSS FSCSHELPAP  780
GPYGRSAAGP HAAAGPMYTG GSDAATEHPA AWPGGGGGGA YCGPSSSCGG VGGAGDPWAT  840
YHGYVGAAAR VLPGGVVDLA QPLLPMLHTG GAGGAAQPPP PPLQPPPAPA ALPPVGCHSL  900
WPPLVAAGGQ AAAAAAAAAA AAQPPSSAPK DAAVATILRQ LQRPPAPAAV QQHHLAVSQH  960
APGGGPGLWP PAAAGDGDGD GGSHLEGGPL LNGRAPGRLF WVGGQLHGLG GGGGLLGALH  1020
APQAAAAQQP QPPPPPPSFS LQPTVLRDLM LVAHQSDSDA GAADVAAEGG SKPALPGTGD  1080
GEVAAVVKAV VEAAKGHAAA AGSLPCAKGG SGGCGLSSSG SIKGGGLGTS SGGGGSGVGG  1140
GVLRRGAPQL VTAEALTVIG PPLDMPLRGE GRPALPLPVC LQQRGPSPGA TAAGATAQKR  1200
PREDSDGSGS DSGAGQGTCR GDAGAQVPDA PAPTAGPRAG TGAGASREAV AAPGSASGDA  1260
GRVCGPPDRG EEQGGLGGAD RDQAGGGSAN AGGGGAAGAA PEAVQTAPSG GGRGDADVGG  1320
GDGDATTAAI VTAATATVPV RAHPDKKTRL LYGRYAAPKA G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150H0G70.0A0A150H0G7_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1194633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.18e-11AP2 family protein