PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantTFDB

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

KXZ48251.1

Organism

Gonium pectorale

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

Protein Properties

Length: 230aa MW: 24354.3 Da PI: 6.6696

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ48251.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	23.8	1.2e-07	2	40	36	74
TTEEEEE-TTTSSEEETTT--SS--S-STTTT------- CS SBP 36 sgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrr 74 +g++ rfC qCs+f ++s f+ ++r+C ++L++ + r KXZ48251.1 2 DGRSVRFCDQCSKFEDISLFEGSRRTCNDKLERTRQARS 40 67889**********************999987654442 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51141	11.451	1	42	IPR004333	Transcription factor, SBP-box
SuperFamily	SSF103612	6.8E-7	2	42	IPR004333	Transcription factor, SBP-box
Gene3D	G3DSA:4.10.1100.10	9.7E-7	2	28	IPR004333	Transcription factor, SBP-box
Pfam	PF03110	4.8E-9	2	39	IPR004333	Transcription factor, SBP-box

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MDGRSVRFCD QCSKFEDISL FEGSRRTCND KLERTRQARS DKRRRLSEHA RRAALRLQAR 60 RVAPYSGASI AGKRSHSGLY GLYGEDDCDD DEDWELEASG VLPLRGPPSK RTRELSPFAL 120 PLAHLPLGPL PPLPVNCLAA DADGLQAEGE EGRQDALKTL VGAFRSAVSS SGGRGLADVA 180 ALLLAELDAA ANQQGVQLRP VEASAGAAHE APLAAGGGPL PITSAHGSPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	41	45	KRRRL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150GEG3	1e-161	A0A150GEG3_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP20	12	101