PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ47943.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family WRKY
Protein Properties Length: 521aa    MW: 55880.3 Da    PI: 7.8579
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ47943.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.51.5e-2950107259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg++WrKYG K vkgs++prsYY+C++agC +kk vers+ d++v+ + Y+geH h+
  KXZ47943.1  50 SDGWQWRKYGEKLVKGSPNPRSYYKCSHAGCLAKKIVERSEADGTVLSTEYKGEHCHP 107
                 7********************************************************7 PP
2WRKY103.41.2e-32235293159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +dDgy+WrKYGqK+vkgs++pr+YY+Ct+ gC v+k+vers ed++ +++tYeg+Hnh+
  KXZ47943.1 235 MDDGYRWRKYGQKQVKGSPYPRAYYKCTHVGCLVRKHVERSGEDENRFIVTYEGQHNHK 293
                 59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-2735109IPR003657WRKY domain
PROSITE profilePS5081128.44944109IPR003657WRKY domain
SuperFamilySSF1182908.5E-2547109IPR003657WRKY domain
SMARTSM007741.2E-3349108IPR003657WRKY domain
PfamPF031063.0E-2351107IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.8E-32225295IPR003657WRKY domain
SuperFamilySSF1182901.31E-28229295IPR003657WRKY domain
PROSITE profilePS5081132.592230295IPR003657WRKY domain
SMARTSM007743.8E-38235294IPR003657WRKY domain
PfamPF031062.2E-25236293IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MDSALQRPSA RLPLPIPART EAANAVEASR LAKREPEPRV GTGKQSVANS DGWQWRKYGE  60
KLVKGSPNPR SYYKCSHAGC LAKKIVERSE ADGTVLSTEY KGEHCHPAPL TIKTSRFKPK  120
PKAEAQLPVP QLVEPPQACS LPLPLPPVPV GMLPLSGGGM LPIPDTLRSD FPAYAEEAER  180
ELQSNSNSPD LGPSAKRQRT EAGAMRTRAA ADEDDEASAG PTSTSTQRIV DASNMDDGYR  240
WRKYGQKQVK GSPYPRAYYK CTHVGCLVRK HVERSGEDEN RFIVTYEGQH NHKPPTTGSR  300
RRSPKETEEE YEGEEAEEDS SQPTSPQRGG QQLHVQPQAG SRAQQAQLQA QQQAQQQAQQ  360
QAQQQAQQQA ANNNAHPLAD LGHLQHLQVA TSAALQHAAL SGALPIVSYN SLTNEALASL  420
GLSSGALQGM EALNALNLAS VGNLADLTNL LRQHTQIDMA LAAQAQAMDA WDPLACLITP  480
RPNVSPPGGL GLPAQGVPSA GTGRQNKAAL VSAKQASTAE A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-2551295177Probable WRKY transcription factor 4
2lex_A6e-2551295177Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00094SELEXTransfer from AT2G04880Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001692342.11e-174WRKY family transcription factor
TrEMBLA0A150GDT50.0A0A150GDT5_GONPE; Uncharacterized protein
STRINGEDP042921e-174(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4691626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07100.24e-43WRKY DNA-binding protein 26