PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Orthologous Group |

Basic Information? help Back to Top

TF ID

KXZ41746.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

Nin-like

Protein Properties

Length: 890aa MW: 88860.4 Da PI: 6.1258

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ41746.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	54.3	2.7e-17	735	779	5	49
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 +s ++l+++++ pik++AkeLg++l+ K+ CR++G++RWP Rk+ KXZ41746.1 735 VSRHVLKQHYHRPIKAVAKELGLSLSCFKKECRRLGVPRWPARKL 779 7889****************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.051	718	802	IPR003035	RWP-RK domain
Pfam	PF02042	3.8E-15	735	779	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 890 aa Download sequence Send to blast
MLDSGGINME ALLQPPLPQP PADDAGLTED EKMALMLGST DFFADGLLDS FSVGPDGPKA 60 AALLSGAGTA AAVLAAPGAG AHAGLAAAAV SASLLCVQSS SQVPGAMQRA GPMEPGTYAF 120 GGPGSPALVR TSVAAAPLGG RTQSSSSDAG GAASAALTAA TRLGSIDPLD RLLLDWELGR 180 DQQAAAAATT GGPGAAAGGA GATHEHAPWW QSTSAPPALS LQPQQGRPGQ GAGRPLRQLT 240 PAEVVALAAP GGLGARAPAT EELGQDALGW DWGPAAKTHS ISMPTLPGFG TGPSAPVASY 300 GLAGCSYPDG PASMFGPAPG SPQPASVQRA SFTTLRFPLA EREALLPEGV ASDRPGPLPA 360 TAAGLGGAAC RADDQLSPFQ TAAATTVLGA VQLGGAGGQP VPAGQQSVNL PILAFPYMKE 420 GRLGQTEHPG LQGSLVGPAG AGGLRAVSEP LWPPRVRGSF AGGVGAAAEP FVDFIATGGA 480 DSPLISEAPD ARPRAAAGEL SAPLPRKLPA AQAQPVRQPM GLQRLQPFGR LAGPLTGVGG 540 GPAVALPTMV AAAASASVEA DLRGMRASKR GGWETFGAMG PCDDGDDASQ PRGATGAGLQ 600 AASVGFPAGA QLAPFGLSPP SQGPLVHRCG SNGQPGGGAA SGSDGGPHHG ATGTIEAGPT 660 ATADDVRPGP GPGPGRNRGK TAAGARAAAR AAVSWPDGPT AAFSTAAAVA AGSGEAQGPG 720 AGARVGPARR GAAMVSRHVL KQHYHRPIKA VAKELGLSLS CFKKECRRLG VPRWPARKLG 780 CLARMRDTLM RDASAPAESK KEMLDLMQQN LNEIIDNPDA PMYNQWDRVR HEQYKVRSGC 840 RRSGGAAIAG RRKPAARLRR ADSDNDDDDD DDEADVNDSA DSEEAGSDEE

Sequence ? help Back to Top

Protein Sequence Length: 890 aa Download sequence Send to blast

MLDSGGINME ALLQPPLPQP PADDAGLTED EKMALMLGST DFFADGLLDS FSVGPDGPKA  60
AALLSGAGTA AAVLAAPGAG AHAGLAAAAV SASLLCVQSS SQVPGAMQRA GPMEPGTYAF  120
GGPGSPALVR TSVAAAPLGG RTQSSSSDAG GAASAALTAA TRLGSIDPLD RLLLDWELGR  180
DQQAAAAATT GGPGAAAGGA GATHEHAPWW QSTSAPPALS LQPQQGRPGQ GAGRPLRQLT  240
PAEVVALAAP GGLGARAPAT EELGQDALGW DWGPAAKTHS ISMPTLPGFG TGPSAPVASY  300
GLAGCSYPDG PASMFGPAPG SPQPASVQRA SFTTLRFPLA EREALLPEGV ASDRPGPLPA  360
TAAGLGGAAC RADDQLSPFQ TAAATTVLGA VQLGGAGGQP VPAGQQSVNL PILAFPYMKE  420
GRLGQTEHPG LQGSLVGPAG AGGLRAVSEP LWPPRVRGSF AGGVGAAAEP FVDFIATGGA  480
DSPLISEAPD ARPRAAAGEL SAPLPRKLPA AQAQPVRQPM GLQRLQPFGR LAGPLTGVGG  540
GPAVALPTMV AAAASASVEA DLRGMRASKR GGWETFGAMG PCDDGDDASQ PRGATGAGLQ  600
AASVGFPAGA QLAPFGLSPP SQGPLVHRCG SNGQPGGGAA SGSDGGPHHG ATGTIEAGPT  660
ATADDVRPGP GPGPGRNRGK TAAGARAAAR AAVSWPDGPT AAFSTAAAVA AGSGEAQGPG  720
AGARVGPARR GAAMVSRHVL KQHYHRPIKA VAKELGLSLS CFKKECRRLG VPRWPARKLG  780
CLARMRDTLM RDASAPAESK KEMLDLMQQN LNEIIDNPDA PMYNQWDRVR HEQYKVRSGC  840
RRSGGAAIAG RRKPAARLRR ADSDNDDDDD DDEADVNDSA DSEEAGSDEE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150FVW5	0.0	A0A150FVW5_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP6094	2	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	2e-14	RWP-RK domain-containing protein