 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN541748.1_FGP001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
MYB_related |
| Protein Properties |
Length: 228aa MW: 24514.3 Da PI: 4.1896 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN541748.1_FGP001 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 31.7 | 3.4e-10 | 14 | 41 | 1 | 28 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIa 28
+g+WT+eEd +lv +++++G+g+W++++
KN541748.1_FGP001 14 KGPWTPEEDIILVSYIQEHGPGNWRSVP 41
79***********************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MGRPPCCDKE GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PINTAASNRH PIFADATFPS 60
AAGSHTVSSN SDVNQMAAIA RRSPFADCPS SSYASSMDNI SKLLDGFMKT NSPSPPPPPL 120
QHYDGGYYDD VKPAVDVGGN PLLSSFDCMS GADLDCCFDV HQQQPASFME YGGYGGSYGD 180
ESKQQLMNQA APPPLSSIEK WLFDEAAAEQ VADLMDLSDG CCSVPMMF
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC123525 | 0.0 | AC123525.2 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence. |
| GenBank | AK241549 | 0.0 | AK241549.1 Oryza sativa Japonica Group cDNA, clone: J065176M15, full insert sequence. |
| GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
