 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN541245.1_FGP001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 378aa MW: 41889.5 Da PI: 6.7486 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN541245.1_FGP001 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 102.9 | 1.8e-32 | 137 | 193 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK vkg e+prsYY+Ct+ +Cpvkkkvers+ d+++++i Y+g+Hnh+
KN541245.1_FGP001 137 DDGYNWRKYGQKAVKGGEYPRSYYKCTHLSCPVKKKVERSS-DGQITQILYRGQHNHQ 193
8****************************************.***************8 PP
|
| 2 | WRKY | 37.2 | 6e-12 | 303 | 325 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS
WRKY 1 ldDgynWrKYGqKevkgsefprs 23
ldDgy+WrKYGqK+vkg+++pr+
KN541245.1_FGP001 303 LDDGYRWRKYGQKVVKGNPHPRA 325
59********************6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MAIKLNFDFS ATFLFTYAKY LLLHLPIKIC ECFGLQMLPC FFAQGNFEMS HQQALAQVTA 60
EAVHSPYSMI NQSDFSLPFS STTTSVLASQ HVNSSANVSS PREIPTLPSH TDNSNIESTE 120
VSHGFQTTAL TEDKPADDGY NWRKYGQKAV KGGEYPRSYY KCTHLSCPVK KKVERSSDGQ 180
ITQILYRGQH NHQRPPKRRS KDGGALLNEA DVSPEKEDAS TRSEQGSQDY SGKFKASNDG 240
GPSSSRRGDG GEQISGSSDS NDQDEEEVKV EGGATSDGNA NKRHVPAPAQ RIIVQTTSEV 300
DLLDDGYRWR KYGQKVVKGN PHPRAPCYLG PINYSKMGDP FYATTFHQMS SAMMSHWNVG 360
LVLQVIDVDE TQWHNMAL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY302436 | 0.0 | AY302436.1 Oryza sativa (indica cultivar-group) WRKY transcription factor mRNA, partial cds. |
