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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN540892.1_FGP002 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 437aa MW: 45895.3 Da PI: 7.5731 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN540892.1_FGP002 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 15.1 | 4.3e-05 | 329 | 366 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
R +++ +++ L++l+ + +K + a++L +++eYIk L
KN540892.1_FGP002 329 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 366
677888999*******998.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MGDHQMMHAA PAAMYNGGGG TTSSHGVWWS NAVGVPAAAT CSTTTELAGY TAWSSALAAG 60 YDGMVADNGG KQQAKSTPTA SSESPGNNSS VTFQEPASIP DPAAVAAVPQ PGLAGFTDWT 120 QPFMNNGAGL HEFLQDGHHD MSASSLMNHS SNNLALQQAG HHHELLSSFG SDLLLSPTSP 180 YGGFQSSLLR SLMEPTAKQQ QQQQPALAGL QQYHQYQQQM GHTPAAAAKF AQAVGARDSL 240 QFTNDAPFWN PSAGFGMPAA AAAAAAQDQA SVRSAKRSSP APPRAAATLA LKTAMEGVGD 300 SSSVITKKET AFKKPRLETP SPLPTFKVRK EKLGDRITAL QQLVSPFGKT DTASVLHETI 360 EYIKFLHDQV GALSAPYLKN GAHQVPHLKN SSPDKSKHGE ISLKGRGLCL VPISSTFAVA 420 SEVPVELWTP FGANFIR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK069366 | 0.0 | AK069366.1 Oryza sativa Japonica Group cDNA clone:J023012B21, full insert sequence. |