 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KN540599.1_FGP002 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
G2-like |
| Protein Properties |
Length: 366aa MW: 40105.3 Da PI: 8.1169 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN540599.1_FGP002 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.5 | 1.5e-33 | 29 | 83 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWtp+LHerFveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl
KN540599.1_FGP002 29 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 83
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MERAGYGVGV GVGGAGAVGA GVVLSRDPKP RLRWTPDLHE RFVEAVTKLG GPDKATPKSV 60
LRLMGMKGLT LYHLKSHLQK YRLGKQNKKD TGLEASRGAF AAHGISFASA APPTIPSAEN 120
NNAGETPLAD ALRYQIEVQR KLHEQLEVQK KLQMRIEAQG KYLQTILEKA QNNLSYDATG 180
TANLEATRTQ LTDFNLALSG FMNNVSQVCE QNNGELAKAI SEDNLRTTNL GFQLYHGIQE 240
SDDVKCSQDE GLLLLDLNIK GGGYDHLSSN AMRGGESGLK ISQHRSIKES FVVSFWSKHT 300
TSDDQSNQRQ AFCHFTTGEV VVGYLEEDVS GHAQRLDGPV GDLVEQNLRL VVLLQVDRRV 360
RRLILG
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 8e-21 | 29 | 85 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 8e-21 | 29 | 85 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 8e-21 | 29 | 85 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 8e-21 | 29 | 85 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK059448 | 0.0 | AK059448.1 Oryza sativa Japonica Group cDNA clone:001-028-A10, full insert sequence. |
