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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
KN540220.1_FGP002 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 250aa MW: 27032.9 Da PI: 5.6696 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KN540220.1_FGP002 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.9 | 4.2e-14 | 76 | 126 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++ah ++Er+RR+++N+ ++ Lr+l+P + k+ + a+i +v+YIk+Lq
KN540220.1_FGP002 76 KTAHIAVERNRRKQMNENLAVLRSLMPCF---YVKRGDQASIIGGVVDYIKELQ 126
689*************************9...9********************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 250 aa
Download sequence Send
to blast |
MGDALCDQLL LVDSDGGEFI PHHADADADD LFAILETWED CGNVVGGSAP ATTTTLGSPI 60 AAAACISGVV VATTPKTAHI AVERNRRKQM NENLAVLRSL MPCFYVKRGD QASIIGGVVD 120 YIKELQQVLH SLEAKKQRKV YTDQVEFAGA NLVLKTVSQR SPGQAVKIIA ALEGRSLEIL 180 HAKISTVDDT AVNSFTVKSN DLRVISGQSS NSKLKVARFL KMERYIFGQI GIECELSAEE 240 LVQVIQQTFT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287482 | 1e-111 | AK287482.1 Oryza sativa Japonica Group cDNA, clone: J043025B18, full insert sequence. |