 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
KN539767.1_FGP004 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 152aa MW: 16262.7 Da PI: 10.4097 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KN539767.1_FGP004 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 49.8 | 6.9e-16 | 110 | 146 | 2 | 36 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EE CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkk 36
Dg+ WrKYGqKe++g ++pr YYrC+++ gC +++
KN539767.1_FGP004 110 ADGFIWRKYGQKEINGCKHPRLYYRCAFRgqGCLATR 146
6***************************9989*9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 152 aa
Download sequence Send
to blast |
MAMLGSSSAV VLELMTMGYQ SAAYLGELLR AASPAQAGDE QQELAAEILR CCDRVIAKLS 60
RGGATGATTG KKRKAAESAA VTSSSLPVTP TKRRARGAEA VREVRSGTTA DGFIWRKYGQ 120
KEINGCKHPR LYYRCAFRGQ GCLATRRGKN TC
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK108657 | 0.0 | AK108657.1 Oryza sativa Japonica Group cDNA clone:002-148-E07, full insert sequence. |
| GenBank | AY870606 | 0.0 | AY870606.1 Oryza sativa (japonica cultivar-group) WRKY21 mRNA, complete cds. |
